RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 IFNA6P05013 189 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 CSF1P09603 554 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 CBX3Q13185 183 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 AWAT1Q58HT5 328 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 RNASE12Q5GAN4 147 aaKnown RBP13.51□□□□□ -0.25
USP39-211ENST00000465282 RNASE10Q5GAN6 216 aaKnown RBP13.51□□□□□ -0.25
USP39-211ENST00000465282 LPCAT3Q6P1A2 487 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 ARRDC1Q8N5I2 433 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 MOB3AQ96BX8 217 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 ZNF2Q9BSG1 426 aaPredicted RBP13.51□□□□□ -0.25
USP39-211ENST00000465282 TENM1Q9UKZ4 2725 aa13.51□□□□□ -0.25
USP39-211ENST00000465282 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
USP39-211ENST00000465282 IGLV2-14P01704 120 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 CD74P04233 296 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 DUTP33316 252 aaKnown RBP13.5□□□□□ -0.25
USP39-211ENST00000465282 BLCAPP62952 87 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 MEF2DQ14814 521 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 RTL8BQ17RB0 113 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 FBLN7Q53RD9 439 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 C12orf54Q6X4T0 127 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 ZNF66Q6ZN08 573 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 C5orf56Q8N8D9 126 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 ZNF383Q8NA42 475 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 DRAXINQ8NBI3 349 aaPredicted RBP13.5□□□□□ -0.25
USP39-211ENST00000465282 SECTM1Q8WVN6 248 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 SLC5A7Q9GZV3 580 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 PLSCR3Q9NRY6 295 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 LIN7CQ9NUP9 197 aaKnown RBP13.5□□□□□ -0.25
USP39-211ENST00000465282 V9GYH0 126 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
USP39-211ENST00000465282 J3QRK9 145 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 CD3DP04234 171 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 AMY1AP04745 511 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 AMY2AP04746 511 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
USP39-211ENST00000465282 FXYD4P59646 89 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 ABCA11PQ4W5N1 156 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 STEAP1BQ6NZ63 245 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 GLDNQ6ZMI3 551 aaPredicted RBP13.49□□□□□ -0.25
USP39-211ENST00000465282 NPBQ8NG41 125 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 DDB2Q92466 427 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 FLYWCH2Q96CP2 140 aaKnown RBP13.49□□□□□ -0.25
USP39-211ENST00000465282 C5orf30Q96GV9 206 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 SLC35D1Q9NTN3 355 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 PRELID3BQ9Y3B1 194 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 RNF114Q9Y508 228 aa13.49□□□□□ -0.25
USP39-211ENST00000465282 RAB3DO95716 219 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 AKAIN1P0CW23 69 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 LGALS7P47929 136 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 UCP3P55916 312 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 EIF4EBP1Q13541 118 aaPredicted RBP13.48□□□□□ -0.25
USP39-211ENST00000465282 MMDQ15546 238 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 Q8N402 240 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 FAM71E2Q8N5Q1 922 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 Q8N9W7 124 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 BVESQ8NE79 360 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 TSNAXQ99598 290 aaKnown RBP13.48□□□□□ -0.25
USP39-211ENST00000465282 RASL11BQ9BPW5 248 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 THAP7Q9BT49 309 aaPredicted RBP13.48□□□□□ -0.25
USP39-211ENST00000465282 CCL28Q9NRJ3 127 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 KIAA1456Q9P272 454 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 FBN3Q75N90 2809 aa13.48□□□□□ -0.25
USP39-211ENST00000465282 ANKRD20A5PA0PJZ0 165 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 M0QYG6 137 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 NBR2O15453 112 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 NDUFA3O95167 84 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 SPDEFO95238 335 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 S100GP29377 79 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 GNRHRP30968 328 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 F2RL1P55085 397 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 PROK1P58294 105 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 AP3S2P59780 193 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 ZNF45Q02386 682 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 ZNF79Q15937 498 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 CNPY1Q3B7I2 92 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 ARSJQ5FYB0 599 aaPredicted RBP13.47□□□□□ -0.25
USP39-211ENST00000465282 KCTD9Q7L273 389 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
USP39-211ENST00000465282 TAF15Q92804 592 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP39-211ENST00000465282 LINC00473A8K010 186 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 IGKV1-16P04430 117 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 ECI1P42126 302 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 KIR2DS2P43631 304 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 LINC00205P59089 165 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 CATR1Q13166 79 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 TMEM177Q53S58 311 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 LHFPL1Q86WI0 220 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 MFSD4AQ8N468 514 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 C3orf56Q8N813 242 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 GDPD1Q8N9F7 314 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 OSR1Q8TAX0 266 aaPredicted RBP13.46□□□□□ -0.25
USP39-211ENST00000465282 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
USP39-211ENST00000465282 TINAGL1Q9GZM7 467 aaPredicted RBP13.46□□□□□ -0.25
USP39-211ENST00000465282 DISC1C4P0D8 188 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 GPR31O00270 319 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms