RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 RBBP9O75884 186 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 NDUFA3O95167 84 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 CNIH1O95406 144 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 IGHG4P01861 327 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 NFYAP23511 347 aaPredicted RBP9.54□□□□□ -0.88
XRN1-204ENST00000465074 DTYMKP23919 212 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
XRN1-204ENST00000465074 CHRNA7P36544 502 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 CX3CL1P78423 397 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 PITPNAQ00169 270 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 ZNF260Q3ZCT1 412 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 PPP1R27Q86WC6 154 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.54□□□□□ -0.88
XRN1-204ENST00000465074 BVESQ8NE79 360 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 RCC1LQ96I51 464 aaKnown RBP9.54□□□□□ -0.88
XRN1-204ENST00000465074 RAX2Q96IS3 184 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 FAM103A1Q9BTL3 118 aaKnown RBP9.54□□□□□ -0.88
XRN1-204ENST00000465074 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 DIABLOQ9NR28 239 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 NECAP2Q9NVZ3 263 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 FBXO7Q9Y3I1 522 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 ETV7Q9Y603 341 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
XRN1-204ENST00000465074 SHOXO15266 292 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 SSX5O60225 188 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 TUSC2O75896 110 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 CA2P00918 260 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 PTHLHP12272 177 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 RPS19P39019 145 aaKnown RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 MYCNOSP40205 109 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 CDX1P47902 265 aaPredicted RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 ARPC4P59998 168 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 CFHR3Q02985 330 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 RTL8BQ17RB0 113 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 ZNF660Q6AZW8 331 aaPredicted RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 UNQ5815/PRO19632Q6UWF5 114 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 PDPNQ86YL7 162 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 H1FOOQ8IZA3 346 aaPredicted RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 GRPEL2Q8TAA5 225 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 SLC25A38Q96DW6 304 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 YIPF6Q96EC8 236 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 MS4A10Q96PG2 267 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 DCUN1D5Q9BTE7 237 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
XRN1-204ENST00000465074 TPSG1Q9NRR2 321 aa9.53□□□□□ -0.88
XRN1-204ENST00000465074 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
XRN1-204ENST00000465074 MEIS3P1A6NDR6 274 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 PSMB8P28062 276 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 SLC6A1P30531 599 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 LUMP51884 338 aaPredicted RBP9.52□□□□□ -0.89
XRN1-204ENST00000465074 NDPQ00604 133 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 TMEM267Q0VDI3 215 aaPredicted RBP9.52□□□□□ -0.89
XRN1-204ENST00000465074 SRSF7Q16629 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
XRN1-204ENST00000465074 OR2B11Q5JQS5 317 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 Q6ZS49 121 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 LFNGQ8NES3 379 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 DPF1Q92782 380 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 C5orf30Q96GV9 206 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 HARBI1Q96MB7 349 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 RNF5Q99942 180 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 DCSTAMPQ9H295 470 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 GNB4Q9HAV0 340 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 ZNF355PQ9NSJ1 428 aa9.52□□□□□ -0.89
XRN1-204ENST00000465074 FOXA2Q9Y261 457 aaPredicted RBP9.52□□□□□ -0.89
XRN1-204ENST00000465074 DUS4LO95620 317 aaKnown RBP9.51□□□□□ -0.89
XRN1-204ENST00000465074 DIRAS3O95661 229 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 CRYZL1O95825 349 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 CTXN2P0C2S0 81 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 PPIFP30405 207 aaKnown RBP9.51□□□□□ -0.89
XRN1-204ENST00000465074 RAB9AP51151 201 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 PJVKQ0ZLH3 352 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 FXYD3Q14802 87 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 ACTBL2Q562R1 376 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 CNIH2Q6PI25 160 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 CROCCP3Q8IVE0 287 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 GVQW1Q8N7I0 195 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 SAMD12Q8N8I0 201 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 RNF152Q8N8N0 203 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 BEST4Q8NFU0 473 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 OR11H1Q8NG94 326 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 C4orf3Q8WVX3 66 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 ARPC1AQ92747 370 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 S100A16Q96FQ6 103 aaKnown RBP9.51□□□□□ -0.89
XRN1-204ENST00000465074 P2RX4Q99571 388 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 TOLLIPQ9H0E2 274 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 ANXA10Q9UJ72 324 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 SPATA2Q9UM82 520 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 VSIG4Q9Y279 399 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 OR2W1Q9Y3N9 320 aa9.51□□□□□ -0.89
XRN1-204ENST00000465074 LINC00473A8K010 186 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 SPDEFO95238 335 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 IGLV1-40P01703 118 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 APELAP0DMC3 54 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 EGR2P11161 476 aaPredicted RBP9.5□□□□□ -0.89
XRN1-204ENST00000465074 CD40LGP29965 261 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms