RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ECH1Q13011 328 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 TPBGQ13641 420 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 GGTLC2Q14390 218 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 RFX4Q33E94 735 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 SPRNQ5BIV9 151 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 FAM27BQ5VT28 67 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 SMARCD3Q6STE5 483 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 ZNF620Q6ZNG0 422 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 SSX8Q7RTT4 187 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 DHFR2Q86XF0 187 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 ZNF101Q8IZC7 436 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 ZNF491Q8N8L2 437 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 SLC30A7Q8NEW0 376 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 OR4F15Q8NGB8 312 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 OR4K13Q8NH42 304 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 C10orf105Q8TEF2 133 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 CANT1Q8WVQ1 401 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 ERMAPQ96PL5 475 aaPredicted RBP3.17□□□□□ -1.9
UBR4-209ENST00000465036 RBP7Q96R05 134 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 GPX7Q96SL4 187 aaPredicted RBP3.17□□□□□ -1.9
UBR4-209ENST00000465036 NMNAT3Q96T66 252 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 DOK1Q99704 481 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 NIPSNAP1Q9BPW8 284 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 COPS4Q9BT78 406 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 C9orf16Q9BUW7 83 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 TM2D1Q9BX74 207 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 REG4Q9BYZ8 158 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 OR2H1Q9GZK4 316 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 TPK1Q9H3S4 243 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 RERGLQ9H628 205 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 SIAEQ9HAT2 523 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 PLEKHA1Q9HB21 404 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 FAIMQ9NVQ4 179 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 CR1P17927 2039 aa3.17□□□□□ -1.9
UBR4-209ENST00000465036 JMJD1CQ15652 2540 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 IGLV1-36A0A0B4J1U3 117 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 A0A1B0GWB2 263 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 DHRS12A0PJE2 317 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 C5orf49A4QMS7 147 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 C5orf63A6NC05 138 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 A6NIZ1 184 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 LOC110117498-PIK3R3F6TDL0 507 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 SULT1C2O00338 296 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 BHLHE40O14503 412 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 RER1O15258 196 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 GYG2O15488 501 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 NXPH4O95158 308 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 SOX14O95416 240 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OXTP01178 125 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 GYPBP06028 91 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 MELTFP08582 738 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 CST2P09228 141 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 SNRPCP09234 159 aaKnown RBP3.16□□□□□ -1.9
UBR4-209ENST00000465036 TACSTD2P09758 323 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 HLA-GP17693 338 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 COL8A2P25067 703 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 HLA-DMAP28067 261 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 IL2RGP31785 369 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 PYCR1P32322 319 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 GLRXP35754 106 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 MNAT1P51948 309 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 EFNA4P52798 201 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 RAP1BP61224 184 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 VBP1P61758 197 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 SNRPD2P62316 118 aaKnown RBP3.16□□□□□ -1.9
UBR4-209ENST00000465036 RAP1AP62834 184 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 TSPAN31Q12999 210 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 TAL2Q16559 108 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 MICAQ29983 383 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 RSPO1Q2MKA7 263 aaPredicted RBP3.16□□□□□ -1.9
UBR4-209ENST00000465036 SLC36A2Q495M3 483 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OR2T5Q6IEZ7 315 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 BAIAP2L2Q6UXY1 529 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 AHSA2Q719I0 299 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 LHFPL3Q86UP9 236 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 NAA40Q86UY6 237 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OR6V1Q8N148 313 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 ZNF738Q8NE65 137 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OR10G2Q8NGC3 310 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OR2T29Q8NH02 315 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 GNPDA2Q8TDQ7 276 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 NPRL2Q8WTW4 380 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 YIPF5Q969M3 257 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 C9orf85Q96MD7 179 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 CHIAQ9BZP6 476 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 OR2J1Q9GZK6 312 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 ZNF442Q9H7R0 627 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 ARMC1Q9NVT9 282 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 USE1Q9NZ43 259 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 TAAR3PQ9P1P4 343 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 ING4Q9UNL4 249 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 POMPQ9Y244 141 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 GOLT1BQ9Y3E0 138 aa3.16□□□□□ -1.9
UBR4-209ENST00000465036 SAMHD1Q9Y3Z3 626 aaKnown RBP3.16□□□□□ -1.9
UBR4-209ENST00000465036 LHFPL6Q9Y693 200 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms