RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 FCGR2CP31995 323 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 ZNF660Q6AZW8 331 aaPredicted RBP13.54□□□□□ -0.24
VPS52-215ENST00000464425 ZNF833PQ6ZTB9 187 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 C5orf56Q8N8D9 126 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.54□□□□□ -0.24
VPS52-215ENST00000464425 SRRQ9GZT4 340 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 CD3DP04234 171 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 OR8U9P0C7N5 309 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
VPS52-215ENST00000464425 LSAMPQ13449 338 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 PRR31Q5SQ13 230 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 Q8N6K4 173 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 OR6F1Q8NGZ6 308 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 OR8U1Q8NH10 309 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 S100ZQ8WXG8 99 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 S1PR3Q99500 378 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 NABP2Q9BQ15 211 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 AKIP1Q9NQ31 210 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 ZNF221Q9UK13 617 aa13.53□□□□□ -0.24
VPS52-215ENST00000464425 ANKRD20A5PA0PJZ0 165 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 SLC22A5O76082 557 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 PPYP01298 95 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 CD28P10747 220 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 GPR12P47775 334 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 F2RL1P55085 397 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 RNASE10Q5GAN6 216 aaKnown RBP13.52□□□□□ -0.25
VPS52-215ENST00000464425 STEAP1BQ6NZ63 245 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 ZNF251Q9BRH9 671 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 WNT10AQ9GZT5 417 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 PLSCR3Q9NRY6 295 aa13.52□□□□□ -0.25
VPS52-215ENST00000464425 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.25
VPS52-215ENST00000464425 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 M0QZ24 198 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 FGF16O43320 207 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 CT45A6P0DMU7 189 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 CT45A5P0DMU8 189 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 CT45A7P0DMV0 189 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 AADACP22760 399 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 TSPAN5P62079 268 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 MEF2DQ14814 521 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 MSMO1Q15800 293 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 GLDNQ6ZMI3 551 aaPredicted RBP13.51□□□□□ -0.25
VPS52-215ENST00000464425 CENPVQ7Z7K6 275 aaPredicted RBP13.51□□□□□ -0.25
VPS52-215ENST00000464425 ARRDC1Q8N5I2 433 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 DEDD2Q8WXF8 326 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 RITA1Q96K30 269 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 OR2D2Q9H210 308 aa13.51□□□□□ -0.25
VPS52-215ENST00000464425 WNK1Q9H4A3 2382 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 M0QYG6 137 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 PROP1O75360 226 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 FBXO24O75426 580 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 RAB3DO95716 219 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 IFNA6P05013 189 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 AP3S2P59780 193 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 TMEM17Q86X19 198 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 Q8N9W7 124 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 DRAXINQ8NBI3 349 aaPredicted RBP13.5□□□□□ -0.25
VPS52-215ENST00000464425 OR5AU1Q8NGC0 362 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 WIPF2Q8TF74 440 aaPredicted RBP13.5□□□□□ -0.25
VPS52-215ENST00000464425 MOB3AQ96BX8 217 aa13.5□□□□□ -0.25
VPS52-215ENST00000464425 SDHCQ99643 169 aaPredicted RBP13.5□□□□□ -0.25
VPS52-215ENST00000464425 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
VPS52-215ENST00000464425 TINAGL1Q9GZM7 467 aaPredicted RBP13.5□□□□□ -0.25
VPS52-215ENST00000464425 IGKV1D-13A0A0B4J2D9 117 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 IGKV1-13P0DP09 117 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 LINC00205P59089 165 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 TREML4Q6UXN2 200 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 TOMM5Q8N4H5 51 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 RASL11BQ9BPW5 248 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 SDHAF2Q9NX18 166 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 LINC00527Q9UJ94 153 aa13.49□□□□□ -0.25
VPS52-215ENST00000464425 MGAM2Q2M2H8 2515 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 LINC01548A6NM66 108 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 J3QRK9 145 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 TSPAN15O95858 294 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 IGLV2-14P01704 120 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 CNTFRP26992 372 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 CD40LGP29965 261 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 PPP5CP53041 499 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 HERV-K104P61576 105 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 KLF9Q13886 244 aaPredicted RBP13.48□□□□□ -0.25
VPS52-215ENST00000464425 MMDQ15546 238 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 BAK1Q16611 211 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 NSUN5P1Q3KNT7 163 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 LPCAT3Q6P1A2 487 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 C10orf99Q6UWK7 81 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 ZBTB34Q8NCN2 500 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 OR8H1Q8NGG4 311 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 OR4D10Q8NGI6 311 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
VPS52-215ENST00000464425 NOL4LQ96MY1 436 aaPredicted RBP13.48□□□□□ -0.25
VPS52-215ENST00000464425 CITED2Q99967 270 aaPredicted RBP13.48□□□□□ -0.25
VPS52-215ENST00000464425 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms