RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TRAT1Q6PIZ9 186 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 PCSK4Q6UW60 755 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 FAM58AQ8N1B3 248 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 PNKDQ8N490 385 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 RELTQ969Z4 430 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 GNB1LQ9BYB4 327 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 WNT5BQ9H1J7 359 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 OPN3Q9H1Y3 402 aaPredicted RBP6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 PATZ1Q9HBE1 687 aaKnown RBP6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 ASCL3Q9NQ33 180 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 IL36BQ9NZH7 164 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 IL17BQ9UHF5 180 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 KCNS2Q9ULS6 477 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC45A2Q9UMX9 530 aa6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 CHCHD2Q9Y6H1 151 aaPredicted RBP6.08□□□□□ -1.44
CLSTN1-204ENST00000464286 CCDC163A0A0D9SF12 145 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 C5orf63A6NC05 138 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 LRRC30A6NM36 301 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 J3QT63 122 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 NXPH2O95156 264 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 CLDN14O95500 239 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 IL6RP08887 468 aaPredicted RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 EN2P19622 333 aaPredicted RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 GCH1P30793 250 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 CHRNA7P36544 502 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 OPRK1P41145 380 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 HTD2P86397 168 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 OR5I1Q13606 314 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 RPEL1Q2QD12 228 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 PDLIM3Q53GG5 364 aaPredicted RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 PRAMEF20Q5VT98 475 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 LEMD1Q68G75 181 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 OR8G2PQ6IF36 304 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 CALHM1Q8IU99 346 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 GCNT2Q8N0V5 402 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF645Q8N7E2 425 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 ZIC4Q8N9L1 334 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 NINJ1Q92982 152 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 BORCS7Q96B45 105 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 FAM122AQ96E09 287 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC35E1Q96K37 410 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 HSPB9Q9BQS6 159 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 CHRDL1Q9BU40 450 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 RPP25Q9BUL9 199 aaKnown RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 RTL8AQ9BWD3 113 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 QTRT1Q9BXR0 403 aaKnown RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 NPCDR1Q9BY65 106 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 VSIRQ9H7M9 311 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 SLC25A22Q9H936 323 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 LPAR2Q9HBW0 351 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 BET1LQ9NYM9 111 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 MRPS16Q9Y3D3 137 aaKnown RBP6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 ARID1AO14497 2285 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 MYO7AQ13402 2215 aa6.07□□□□□ -1.44
CLSTN1-204ENST00000464286 TNRC6AQ8NDV7 1962 aaKnown RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 IGHV1OR15-9A0A0B4J2B8 117 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF891A8MT65 544 aaPredicted RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SIRPB1O00241 398 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SH2D1BO14796 132 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 TNFSF12O43508 249 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF253O75346 499 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF205O95201 554 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 IGKV1-5P01602 117 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 HLA-DQA1P01909 254 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 P04436 131 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 CD55P08174 381 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 OR10J4P0C629 311 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 B4GALT1P15291 398 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF16P17020 682 aaPredicted RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 CHRNB4P30926 498 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 TIMP3P35625 211 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 THBS3P49746 956 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 RAB7AP51149 207 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 HNRNPA3P51991 378 aaKnown RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ATP5IP56385 69 aaPredicted RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 RHOBP62745 196 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 RAB30Q15771 203 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 CEACAM16Q2WEN9 425 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 HLA-DRB5Q30154 266 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 DCAF12Q5T6F0 453 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ACSM6Q6P461 480 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 C16orf47Q6ZP98 133 aaPredicted RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SHISA6Q6ZSJ9 500 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 H2BFWTQ7Z2G1 175 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SMIM15Q7Z3B0 74 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 HAPLN4Q86UW8 402 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 FGFRL1Q8N441 504 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 OR56B2PQ8NGI1 322 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 DTD1Q8TEA8 209 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 CCDC74BQ96LY2 380 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 HSD17B10Q99714 261 aaKnown RBP6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 TXN2Q99757 166 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 SFXN3Q9BWM7 321 aa6.06□□□□□ -1.44
CLSTN1-204ENST00000464286 ZNF552Q9H707 407 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms