RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TMEM213A2RRL7 107 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 DBX1A6NMT0 343 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 A8MWP6 167 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 RTL8CO15255 209 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 GPX5O75715 221 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 PI3P19957 117 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 TCTAP57738 103 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 LINC00205P59089 165 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 GUCA2BQ16661 112 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 SLC22A6Q4U2R8 563 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 ZNF880Q6PDB4 577 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 SLC16A13Q7RTY0 426 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 ACBD7Q8N6N7 88 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 GVQW1Q8N7I0 195 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 DYNLRB2Q8TF09 96 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 TSEN15Q8WW01 171 aaKnown RBP5.69□□□□□ -1.5
SMC3-202ENST00000462899 CACNG8Q8WXS5 425 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 LGALS12Q96DT0 336 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 TSNAXQ99598 290 aaKnown RBP5.69□□□□□ -1.5
SMC3-202ENST00000462899 ALG8Q9BVK2 526 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 AKIP1Q9NQ31 210 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 MLXQ9UH92 298 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 PEX16Q9Y5Y5 336 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
SMC3-202ENST00000462899 A0A0B4J203 849 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 KIR2DL5BA0A0G2JN68 375 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 KIR2DL5BA0A0G2JPC4 375 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 FAM223BA6NKX1 122 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 H7C2Y5 167 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 DCTN3O75935 186 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 FUT3P21217 361 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 CBLN1P23435 193 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 BDKRB2P30411 391 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 SOX2P48431 317 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 RPL11P62913 178 aaKnown RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 MRPL28Q13084 256 aaKnown RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 RIPK1Q13546 671 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 EXOSC2Q13868 293 aaKnown RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 ATP6AP1Q15904 470 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 XAF1Q6GPH4 301 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 PDPNQ86YL7 162 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 KIR2DL5AQ8N109 375 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 KIR2DL5BQ8NHK3 375 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 GALMQ96C23 342 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 ORAI1Q96D31 301 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 ABHD14BQ96IU4 210 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 ZNF184Q99676 751 aaPredicted RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 FAM107BQ9H098 131 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 ARGLU1Q9NWB6 273 aaPredicted RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 ENOPH1Q9UHY7 261 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 ARL2BPQ9Y2Y0 163 aa5.68□□□□□ -1.5
SMC3-202ENST00000462899 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
SMC3-202ENST00000462899 UBE2QL1A1L167 161 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 PPP5D1E7EU14 171 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 G3V2T6 193 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 UBE2CO00762 179 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 PDCD6O75340 191 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 NAPSAO96009 420 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 OR9G9P0C7N8 305 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 CPEP16870 476 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 CTRB1P17538 263 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 GABRB1P18505 474 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 CALB2P22676 271 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 CAPGP40121 348 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 LGALS7P47929 136 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 GTF2A1P52655 376 aaPredicted RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 APOC4P55056 127 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 SNRPGP62308 76 aaKnown RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 RHOGP84095 191 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 GPR176Q14439 515 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 ZNF57Q68EA5 555 aaPredicted RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 CTRB2Q6GPI1 263 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 LHFPL3Q86UP9 236 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 SPATA24Q86W54 205 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 GPHB5Q86YW7 130 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 TMEM217Q8N7C4 229 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 DRAXINQ8NBI3 349 aaPredicted RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 OR52B4Q8NGK2 314 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 GPR148Q8TDV2 347 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 TRUB1Q8WWH5 349 aaKnown RBP5.67□□□□□ -1.5
SMC3-202ENST00000462899 PTX4Q96A99 478 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 NSL1Q96IY1 281 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 COA4Q9NYJ1 87 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 KCNIP1Q9NZI2 227 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 LRRC42Q9Y546 428 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 SELENOKQ9Y6D0 94 aa5.67□□□□□ -1.5
SMC3-202ENST00000462899 TRAV8-7A0A075B6U6 113 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 TRBV5-5A0A0J9YX44 114 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
SMC3-202ENST00000462899 BAG2O95816 211 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 HLA-AP01891 365 aaKnown RBP5.66□□□□□ -1.5
SMC3-202ENST00000462899 PRH1P02810 166 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 CD2P06729 351 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 C8orf88P0DMB2 117 aa5.66□□□□□ -1.5
SMC3-202ENST00000462899 MGMTP16455 207 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms