RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SCGB1C1Q8TD33 95 aa9.75□□□□□ -0.85
TRAPPC3-205ENST00000462715 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
TRAPPC3-205ENST00000462715 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
TRAPPC3-205ENST00000462715 SHANK1Q9Y566 2161 aa9.75□□□□□ -0.85
TRAPPC3-205ENST00000462715 NCKAP5O14513 1909 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 SVILO95425 2214 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 TRBV9A0A0B4J1U6 114 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 TMPRSS2O15393 492 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 GYPAP02724 150 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 SLC25A6P12236 298 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 GP1BBP13224 206 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 CTLA4P16410 223 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 MDH2P40926 338 aaKnown RBP9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 ACKR1Q16570 336 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 RBM7Q9Y580 266 aaKnown RBP9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 PRRG2O14669 202 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 GFRA1P56159 465 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 IGFBP7Q16270 282 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 C1orf185Q5T7R7 199 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 ODF3L1Q8IXM7 274 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 Q8N976 141 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 RELTQ969Z4 430 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 BANF2Q9H503 90 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 SPRR3Q9UBC9 169 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 IL19Q9UHD0 177 aa9.74□□□□□ -0.85
TRAPPC3-205ENST00000462715 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 A0A0U1RQK1 487 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF320A2RRD8 509 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 NPIPA3F8WFD2 350 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 NUPR1O60356 82 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 WISP2O76076 250 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 OR3A4PP47883 348 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 B3GALT5-AS1P59052 145 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 RNPS1Q15287 305 aaKnown RBP9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 PMCHL1Q16048 86 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 SLC25A53Q5H9E4 307 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 PRR27Q6MZM9 219 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF709Q8N972 641 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 STARD4Q96DR4 205 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 TMEM222Q9H0R3 208 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 PARLQ9H300 379 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF430Q9H8G1 570 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ELOVL5Q9NYP7 299 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 IGLC7A0M8Q6 106 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 FAHP16930 419 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 TSPOP30536 169 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 GNRHRP30968 328 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 GABRA2P47869 451 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 OR8B8Q15620 311 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 PSG3Q16557 428 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 COX19Q49B96 90 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 TMEM217Q8N7C4 229 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 FAM57AQ8TBR7 257 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF835Q9Y2P0 537 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 RFNGQ9Y644 331 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF407Q9C0G0 2248 aa9.73□□□□□ -0.85
TRAPPC3-205ENST00000462715 NKX2-6A6NCS4 301 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 H3BML4 177 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 SIRPB1O00241 398 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 CRISP2P16562 243 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 LHX2P50458 406 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 FGF8P55075 233 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 RUNX1Q01196 453 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 FMODQ06828 376 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 MRPL49Q13405 166 aaKnown RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 SP6Q3SY56 376 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 DOK3Q7L591 496 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 OR5P3Q8WZ94 311 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 KLHDC3Q9BQ90 382 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 SF3B5Q9BWJ5 86 aaKnown RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF286AQ9HBT8 521 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 CLN8Q9UBY8 286 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 GJE1A6NN92 205 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 SHISA8B8ZZ34 492 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 PHF1O43189 567 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 ZNF253O75346 499 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 GNLYP22749 145 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 OTX1P32242 354 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 ASCL1P50553 236 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 FAM71F2Q6NXP2 309 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 VHLLQ6RSH7 139 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 PRSS57Q6UWY2 283 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 LSRQ86X29 649 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 OR5D18Q8NGL1 313 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 OR4S2Q8NH73 311 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 MRPL30Q8TCC3 161 aaKnown RBP9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 GPER1Q99527 375 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 TP53TG3Q9ULZ0 132 aa9.72□□□□□ -0.85
TRAPPC3-205ENST00000462715 DNAJC13O75165 2243 aa9.71□□□□□ -0.85
TRAPPC3-205ENST00000462715 FREM3P0C091 2139 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms