RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 PLGRKTQ9HBL7 147 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 PALMDQ9NP74 551 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 ZNF355PQ9NSJ1 428 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 ZNF221Q9UK13 617 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 MGAT4AQ9UM21 535 aa12.33□□□□□ -0.44
COL7A1-204ENST00000462475 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 M0R1X1 148 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 SLC17A2O00624 439 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 CASQ2O14958 399 aaPredicted RBP12.32□□□□□ -0.44
COL7A1-204ENST00000462475 APOA2P02652 100 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 VEGFCP49767 419 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 DEFA5Q01523 94 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 PJVKQ0ZLH3 352 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 ANKRD13BQ86YJ7 626 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 OR5T1Q8NG75 326 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 UFD1Q92890 307 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 PECRQ9BY49 303 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 RANGRFQ9HD47 186 aaPredicted RBP12.32□□□□□ -0.44
COL7A1-204ENST00000462475 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
COL7A1-204ENST00000462475 AK6Q9Y3D8 172 aaKnown RBP12.32□□□□□ -0.44
COL7A1-204ENST00000462475 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 ANKRD34BA5PLL1 514 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 H3BUA1 57 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 CLDN12P56749 244 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 RPS25P62851 125 aaKnown RBP12.31□□□□□ -0.44
COL7A1-204ENST00000462475 IRF3Q14653 427 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 RAB11BQ15907 218 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
COL7A1-204ENST00000462475 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
COL7A1-204ENST00000462475 TRDCB7Z8K6 153 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 CD3GP09693 182 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 ZP3P21754 424 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 PLA2G7Q13093 441 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
COL7A1-204ENST00000462475 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 C5orf30Q96GV9 206 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
COL7A1-204ENST00000462475 LCE6AA0A183 80 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 A8MZ25 164 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 CNIH1O95406 144 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 CRYGBP07316 175 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-204ENST00000462475 OR9G4Q8NGQ1 327 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 HARBI1Q96MB7 349 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 OR2D2Q9H210 308 aa12.29□□□□□ -0.44
COL7A1-204ENST00000462475 A0A0G2JLM5 398 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 BET1O15155 118 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 FABP7O15540 132 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 TRBV12-3P01733 135 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 HSMCR30P0CW71 290 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 SYNJ2BPP57105 145 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 IGSF11Q5DX21 431 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 OR4A4PQ8NGN8 299 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 FAM3DQ96BQ1 224 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 SDHAF2Q9NX18 166 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
COL7A1-204ENST00000462475 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
COL7A1-204ENST00000462475 ARL6IP5O75915 188 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 APELAP0DMC3 54 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 CALRP27797 417 aaKnown RBP12.27□□□□□ -0.45
COL7A1-204ENST00000462475 LGALS7P47929 136 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 SERPINB10P48595 397 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 DYRK1AQ13627 763 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 TPBGQ13641 420 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 MRGPRG-AS1Q2M3A8 158 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 C2orf76Q3KRA6 126 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 MOGAT2Q3SYC2 334 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.45
COL7A1-204ENST00000462475 VCXQ9H320 206 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 SCN3BQ9NY72 215 aa12.27□□□□□ -0.45
COL7A1-204ENST00000462475 HYDINQ4G0P3 5121 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 TMEM272A0A1B0GTI8 110 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
COL7A1-204ENST00000462475 DENRO43583 198 aaKnown RBP12.26□□□□□ -0.45
COL7A1-204ENST00000462475 BRI3O95415 125 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 FCGR3AP08637 254 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 GSTT2P0CG29 244 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 GSTT2BP0CG30 244 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 FABP5Q01469 135 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 HAGHQ16775 308 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 TMEM177Q53S58 311 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 ZNF343Q6P1L6 599 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 BVESQ8NE79 360 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
COL7A1-204ENST00000462475 SPATA25Q9BR10 227 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms