RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 DUTP33316 252 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 TAS2R19P59542 299 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 BLCAPP62952 87 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 DGCR2P98153 550 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 CBX3Q13185 183 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 MMDQ15546 238 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RNASE10Q5GAN6 216 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 SPANXN2Q5MJ10 180 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 GLDNQ6ZMI3 551 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 CCDC190Q86UF4 302 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 C5orf56Q8N8D9 126 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZNF383Q8NA42 475 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 TMEM229BQ8NBD8 167 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 DRAXINQ8NBI3 349 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZBTB34Q8NCN2 500 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 SECTM1Q8WVN6 248 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 C5orf30Q96GV9 206 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RNF5Q99942 180 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZNF2Q9BSG1 426 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 LIN7CQ9NUP9 197 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 V9GYH0 126 aa9.29□□□□□ -0.92
TRAF3IP1-204ENST00000462122 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 AMY1AP04745 511 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 AMY2AP04746 511 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RRASP10301 218 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ETV6P41212 452 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 FXYD4P59646 89 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 TSPAN5P62079 268 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 KCTD9Q7L273 389 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 TMEM17Q86X19 198 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 OR6Q1Q8NGQ2 317 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 MOB3AQ96BX8 217 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 HSD17B10Q99714 261 aaKnown RBP9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 SLC5A7Q9GZV3 580 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 PLSCR3Q9NRY6 295 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 KIAA1456Q9P272 454 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 PRELID3BQ9Y3B1 194 aa9.28□□□□□ -0.92
TRAF3IP1-204ENST00000462122 NBR2O15453 112 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 CD74P04233 296 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 CD3DP04234 171 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 IFNA6P05013 189 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 VDAC2P45880 294 aaPredicted RBP9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 PROK1P58294 105 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 MEF2DQ14814 521 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 LPCAT3Q6P1A2 487 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 FAM71E2Q8N5Q1 922 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 C3orf56Q8N813 242 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 Q8N9W7 124 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 NPBQ8NG41 125 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 FLYWCH2Q96CP2 140 aaKnown RBP9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 RASL11BQ9BPW5 248 aa9.27□□□□□ -0.93
TRAF3IP1-204ENST00000462122 LINC00473A8K010 186 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 M0QYG6 137 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 PEX14O75381 377 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 NDUFA3O95167 84 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 SPDEFO95238 335 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 RAB3DO95716 219 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 IGKV1-16P04430 117 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 LGALS7P47929 136 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 F2RL1P55085 397 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 LINC00205P59089 165 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 RPS16P62249 146 aaKnown RBP9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 EIF4EBP1Q13541 118 aaPredicted RBP9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 PYDC2Q56P42 97 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 C9orf152Q5JTZ5 239 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 STEAP1BQ6NZ63 245 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 LINC00299Q6ZSB3 139 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 CMTM1Q8IZ96 169 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 BVESQ8NE79 360 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 DDB2Q92466 427 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 TSNAXQ99598 290 aaKnown RBP9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 ZNF747Q9BV97 191 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 TINAGL1Q9GZM7 467 aaPredicted RBP9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 FXYD6Q9H0Q3 95 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 CCL28Q9NRJ3 127 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 SERTAD4Q9NUC0 356 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 SIGLEC9Q9Y336 463 aa9.26□□□□□ -0.93
TRAF3IP1-204ENST00000462122 RRHO14718 337 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 KCNAB3O43448 404 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 IGHG2P01859 326 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 AKAIN1P0CW23 69 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 S100GP29377 79 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 GNRHRP30968 328 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 KIR2DS2P43631 304 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 UCP3P55916 312 aa9.25□□□□□ -0.93
TRAF3IP1-204ENST00000462122 AP3S2P59780 193 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms