RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ATG5Q9H1Y0 275 aa6.95□□□□□ -1.3
LDB1-203ENST00000461873 DCSTAMPQ9H295 470 aa6.95□□□□□ -1.3
LDB1-203ENST00000461873 IFI27L2Q9H2X8 130 aa6.95□□□□□ -1.3
LDB1-203ENST00000461873 FBXL15Q9H469 300 aa6.95□□□□□ -1.3
LDB1-203ENST00000461873 PRKDCP78527 4128 aaKnown RBP6.94□□□□□ -1.3
LDB1-203ENST00000461873 IGHV7-81A0A0B4J1V7 117 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 C13orf42A0A1B0GVH6 325 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 G3V318 75 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 K7EIL1 84 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 MPPED1O15442 326 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 FABP7O15540 132 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 SCGNO76038 276 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 ACTL6BO94805 426 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 SPDEFO95238 335 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 CT45A6P0DMU7 189 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 CT45A5P0DMU8 189 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 CT45A7P0DMV0 189 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 RRASP10301 218 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 CNTFRP26992 372 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 PSMB8P28062 276 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 TPPP2P59282 170 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 GNB1P62873 340 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 EGFEM1PQ0D2K5 195 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 CD200R1LQ6Q8B3 271 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 ETV3LQ6ZN32 361 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 ODF3L1Q8IXM7 274 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 FAM89BQ8N5H3 189 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
LDB1-203ENST00000461873 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.94□□□□□ -1.3
LDB1-203ENST00000461873 OR10R2Q8NGX6 335 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 HDHD3Q9BSH5 251 aaPredicted RBP6.94□□□□□ -1.3
LDB1-203ENST00000461873 SLA2Q9H6Q3 261 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 SLC35D1Q9NTN3 355 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 RDH8Q9NYR8 311 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 OR1A1Q9P1Q5 309 aa6.94□□□□□ -1.3
LDB1-203ENST00000461873 A0A0G2JLM5 398 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 TMEM272A0A1B0GTI8 110 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 LINC01619G3V211 115 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 H0YJW9 148 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OVOL1O14753 267 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ARPC1BO15143 372 aaKnown RBP6.93□□□□□ -1.3
LDB1-203ENST00000461873 SHOXO15266 292 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 CREBL2O60519 120 aaPredicted RBP6.93□□□□□ -1.3
LDB1-203ENST00000461873 SAP30O75446 220 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 NDUFA3O95167 84 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OR8U9P0C7N5 309 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 NHLRC4P0CG21 123 aaPredicted RBP6.93□□□□□ -1.3
LDB1-203ENST00000461873 GNB3P16520 340 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 RAB6AP20340 208 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 GALP22466 123 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
LDB1-203ENST00000461873 LGALS7P47929 136 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OR10A3P58181 314 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 KRTAP10-11P60412 298 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 CX3CL1P78423 397 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 QRFPP83859 136 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 PITPNAQ00169 270 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 TATDN3Q17R31 274 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 TIMM50Q3ZCQ8 353 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ZNF562Q6V9R5 426 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 C5orf24Q7Z6I8 188 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ZNF429Q86V71 674 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ZNF491Q8N8L2 437 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 RNF152Q8N8N0 203 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OR5AN1Q8NGI8 311 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 GRPEL2Q8TAA5 225 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 DYNC2LI1Q8TCX1 351 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ARPC1AQ92747 370 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 PTX4Q96A99 478 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ADTRPQ96IZ2 230 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 HARBI1Q96MB7 349 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OR4C12Q96R67 309 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 ELOVL1Q9BW60 279 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 OR2D2Q9H210 308 aa6.93□□□□□ -1.3
LDB1-203ENST00000461873 A0A0A6YYD4 124 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 IFITM5A6NNB3 132 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
LDB1-203ENST00000461873 SLC25A17O43808 307 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 CA2P00918 260 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 TRGV3P03979 118 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 FCGR3AP08637 254 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 CTXN2P0C2S0 81 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 LUMP51884 338 aaPredicted RBP6.92□□□□□ -1.3
LDB1-203ENST00000461873 TMEM50BP56557 158 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 GNG2P59768 71 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 CFHR3Q02985 330 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 FXYD3Q14802 87 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 PSG5Q15238 335 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 VMA21Q3ZAQ7 101 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 AKIRIN2Q53H80 203 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 TPRA1Q86W33 373 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 LFNGQ8NES3 379 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 OR6Q1Q8NGQ2 317 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 RITA1Q96K30 269 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 TMEM68Q96MH6 324 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 MS4A10Q96PG2 267 aa6.92□□□□□ -1.3
LDB1-203ENST00000461873 B9D2Q9BPU9 175 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms