RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DNMT1P26358 1616 aaKnown RBP1.4□□□□□ -2.18
HDAC6-212ENST00000461608 TMEM210A6NLX4 147 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 LY6LH3BQJ8 138 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 MRASO14807 208 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 IL6P05231 212 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 ESDP10768 282 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 MYL12AP19105 171 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 CD24P25063 80 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 BLVRBP30043 206 aaPredicted RBP1.4□□□□□ -2.19
HDAC6-212ENST00000461608 COILP38432 576 aaPredicted RBP1.4□□□□□ -2.19
HDAC6-212ENST00000461608 CDKN2CP42773 168 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 CXCR4P61073 352 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 VBP1P61758 197 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 HLA-DRB3P79483 266 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 DEFA6Q01524 100 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 FADDQ13158 208 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM31Q5JXX7 168 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 FAM78BQ5VT40 261 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 LPCAT4Q643R3 524 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 C8orf74Q6P047 294 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 ATP5L2Q7Z4Y8 100 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM156Q8N614 296 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 RNF133Q8WVZ7 376 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 DGCR14Q96DF8 476 aaKnown RBP1.4□□□□□ -2.19
HDAC6-212ENST00000461608 STACQ99469 402 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 DERL2Q9GZP9 239 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM222Q9H0R3 208 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 ATPIF1Q9UII2 106 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 C3orf18Q9UK00 162 aa1.4□□□□□ -2.19
HDAC6-212ENST00000461608 MAP3K5Q99683 1374 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 SMIM23A6NLE4 172 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 ODF3BA8MYP8 253 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 H0Y980 276 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 UBE2L6O14933 153 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 SULT1B1O43704 296 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 DCTN3O75935 186 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 AHSA1O95433 338 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 KRT75O95678 551 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 TYMSP04818 313 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 ISG15P05161 165 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF7P17097 686 aaPredicted RBP1.39□□□□□ -2.19
HDAC6-212ENST00000461608 GABRA4P48169 554 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM33P57088 247 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 B2MP61769 119 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 MLLT11Q13015 90 aaPredicted RBP1.39□□□□□ -2.19
HDAC6-212ENST00000461608 STX5Q13190 355 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 COQ5Q5HYK3 327 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 SLC51BQ86UW2 128 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 NAA40Q86UY6 237 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 MSRB3Q8IXL7 192 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 DNAJC30Q96LL9 226 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 C9orf16Q9BUW7 83 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 OR51I2Q9H344 312 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 MAP1LC3AQ9H492 121 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 FKBP14Q9NWM8 211 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 KLK5Q9Y337 293 aaPredicted RBP1.39□□□□□ -2.19
HDAC6-212ENST00000461608 PCYT1BQ9Y5K3 369 aaPredicted RBP1.39□□□□□ -2.19
HDAC6-212ENST00000461608 FAM215AQ9Y5M1 114 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 DSCAML1Q8TD84 2053 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 CRB1P82279 1406 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 C9orf84Q5VXU9 1444 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF407Q9C0G0 2248 aa1.39□□□□□ -2.19
HDAC6-212ENST00000461608 BICRAQ9NZM4 1560 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CC2D2AQ9P2K1 1620 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 A0A0J9YX75 114 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 OR6C6A6NF89 314 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 SDHAF1A6NFY7 115 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 KNCNA6PVL3 124 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 DISC1C4P0D8 188 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 M0QZ92 97 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 ACOX3O15254 700 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 IGHV1-69P01742 117 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 HLA-DRAP01903 254 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 RPS17P08708 135 aaKnown RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 RPSAP08865 295 aaKnown RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 UCHL1P09936 223 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 COX5BP10606 129 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CD36P16671 472 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CXCL3P19876 107 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CRHBPP24387 322 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 G0S2P27469 103 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 DAPP51397 102 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 AP3S2P59780 193 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 DR1Q01658 176 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 GNA12Q03113 381 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 S100A7AQ86SG5 101 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 TESCQ96BS2 214 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 ANKRD36BP1Q96IX9 119 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 SELENOSQ9BQE4 189 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 OR51V1Q9H2C8 321 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 SLC2A9Q9NRM0 540 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 NDUFB11Q9NX14 153 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 BABAM2Q9NXR7 383 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 DKKL1Q9UK85 242 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 POLR3HQ9Y535 204 aaPredicted RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CHD2O14647 1828 aaKnown RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 COL5A1P20908 1838 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms