RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
SMPD4-216ENST00000461187 ELOVL1Q9BW60 279 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 PECRQ9BY49 303 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 PLGRKTQ9HBL7 147 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 RDH8Q9NYR8 311 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 STUB1Q9UNE7 303 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 AK6Q9Y3D8 172 aaKnown RBP11.26□□□□□ -0.61
SMPD4-216ENST00000461187 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 H3BUA1 57 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 M0R1X1 148 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 CRYGBP07316 175 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 IGHV4-30-4P0DP06 118 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 LYL1P12980 280 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 TPBGQ13641 420 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-216ENST00000461187 UFD1Q92890 307 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 RANGRFQ9HD47 186 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-216ENST00000461187 ZNF355PQ9NSJ1 428 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 SLC35D1Q9NTN3 355 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 C19orf73Q9NVV2 129 aa11.25□□□□□ -0.61
SMPD4-216ENST00000461187 C13orf42A0A1B0GVH6 325 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 A8MZ25 164 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 LDLRAD4O15165 306 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 ZP3P21754 424 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 CLDN12P56749 244 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 RPS25P62851 125 aaKnown RBP11.24□□□□□ -0.61
SMPD4-216ENST00000461187 KLF5Q13887 457 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-216ENST00000461187 RAB11BQ15907 218 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 RSRP1Q9BUV0 290 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
SMPD4-216ENST00000461187 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 CNIH1O95406 144 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 CD3GP09693 182 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 PLA2G7Q13093 441 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 C2orf76Q3KRA6 126 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 MOGAT2Q3SYC2 334 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 IL34Q6ZMJ4 242 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 OR56B1Q8NGI3 324 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 OR4A4PQ8NGN8 299 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 FAM3DQ96BQ1 224 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 VCXQ9H320 206 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 SDHAF2Q9NX18 166 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
SMPD4-216ENST00000461187 KCNK7Q9Y2U2 307 aa11.23□□□□□ -0.61
SMPD4-216ENST00000461187 DENRO43583 198 aaKnown RBP11.22□□□□□ -0.61
SMPD4-216ENST00000461187 ARL6IP5O75915 188 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 BRI3O95415 125 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 HSMCR30P0CW71 290 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 LGALS7P47929 136 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 SERPINB10P48595 397 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 DEFA5Q01523 94 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 TRAM1Q15629 374 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 OR2D2Q9H210 308 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 DUSP21Q9H596 190 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
SMPD4-216ENST00000461187 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.61
SMPD4-216ENST00000461187 BET1O15155 118 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 FABP7O15540 132 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 FCGR3AP08637 254 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 GSTT2P0CG29 244 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 GSTT2BP0CG30 244 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 PSMA1P25786 263 aaKnown RBP11.21□□□□□ -0.61
SMPD4-216ENST00000461187 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.61
SMPD4-216ENST00000461187 SYNJ2BPP57105 145 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 FABP5Q01469 135 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 TMEM177Q53S58 311 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 BVESQ8NE79 360 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 HARBI1Q96MB7 349 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-216ENST00000461187 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 RAB22AQ9UL26 194 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 V9GY05 133 aa11.21□□□□□ -0.61
SMPD4-216ENST00000461187 TRBV6-7A0A0A0MS04 114 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 LCE6AA0A183 80 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 RBMXL2O75526 392 aaKnown RBP11.2□□□□□ -0.62
SMPD4-216ENST00000461187 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 AADACP22760 399 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 MLLT11Q13015 90 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-216ENST00000461187 DYRK1AQ13627 763 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 HES5Q5TA89 166 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 ZFAND6Q6FIF0 208 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
SMPD4-216ENST00000461187 THAP7Q9BT49 309 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-216ENST00000461187 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms