RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-216	ENST00000460957	GAB2	Q9UQC2	676 aa		12.53	□□□□□ -0.4
GGA1-216	ENST00000460957	OR2W1	Q9Y3N9	320 aa		12.53	□□□□□ -0.4
GGA1-216	ENST00000460957	MEIS3P1	A6NDR6	274 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ADARB2-AS1	A8MUL3	147 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	SHOX	O15266	292 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ATP6V0E1	O15342	81 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	TUSC2	O75896	110 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	SPDEF	O95238	335 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ELANE	P08246	267 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ECSCR	Q19T08	205 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ANKRD13B	Q86YJ7	626 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	C1QL4	Q86Z23	238 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF645	Q8N7E2	425 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	GVQW1	Q8N7I0	195 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	ACOT12	Q8WYK0	555 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	AP3S1	Q92572	193 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	HARBI1	Q96MB7	349 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	DCUN1D5	Q9BTE7	237 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	MRPS7	Q9Y2R9	242 aa	Known RBP	12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	WSB1	Q9Y6I7	421 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	A3GALT2	U3KPV4	340 aa		12.52	□□□□□ -0.41
GGA1-216	ENST00000460957	IGHV7-81	A0A0B4J1V7	117 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	TRAV41	A0A0B4J266	112 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	FAM25A	B3EWG3	89 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	FAM25C	B3EWG5	89 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	FAM25G	B3EWG6	89 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	NOL3	O60936	208 aa	Known RBP	12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	IGKV1-16	P04430	117 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	PTHLH	P12272	177 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	LINC00205	P59089	165 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	FOXE3	Q13461	319 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	PSG5	Q15238	335 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	HOGA1	Q86XE5	327 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	BVES	Q8NE79	360 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	PRELID3B	Q9Y3B1	194 aa		12.51	□□□□□ -0.41
GGA1-216	ENST00000460957	WNK1	Q9H4A3	2382 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	NBEAL1	Q6ZS30	2694 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	SLC25A17	O43808	307 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	PROP1	O75360	226 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	GABARAP	O95166	117 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	CNIH1	O95406	144 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	IGF1	P05019	195 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	CD40LG	P29965	261 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	SLC6A1	P30531	599 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	LGALS7	P47929	136 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	TAS2R20	P59543	309 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	GNB1	P62873	340 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF695	Q8IW36	515 aa		12.5	□□□□□ -0.41
GGA1-216	ENST00000460957	CRYZL1	O95825	349 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	CA2	P00918	260 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	HLA-DQB1	P01920	261 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	RPLP1	P05386	114 aa	Known RBP	12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	FCGR2C	P31995	323 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	PRSS3	P35030	304 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	RAB25	P57735	213 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	HERV-K104	P61576	105 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	CX3CL1	P78423	397 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	VMA21	Q3ZAQ7	101 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	C8orf86	Q6ZUL3	223 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	KCTD9	Q7L273	389 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	SECTM1	Q8WVN6	248 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	CMTM3	Q96MX0	182 aa		12.49	□□□□□ -0.41
GGA1-216	ENST00000460957	NAA50	Q9GZZ1	169 aa	Known RBP	12.49	□□□□□ -0.41
GGA1-216	ENST00000460957		A0A1W2PN81	502 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957		G3V318	75 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957		G3V4G9	280 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	FCGR3B	O75015	233 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	IGHG4	P01861	327 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	APOA1	P02647	267 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	EIF4E	P06730	217 aa	Known RBP	12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	DUT	P33316	252 aa	Known RBP	12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	CHRNA7	P36544	502 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	FXYD4	P59646	89 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	CDK10	Q15131	360 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	UNQ5815/PRO19632	Q6UWF5	114 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	LCNL1	Q6ZST4	164 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	PPP1R27	Q86WC6	154 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	OR5AP2	Q8NGF4	316 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	GRPEL2	Q8TAA5	225 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	TCTEX1D2	Q8WW35	142 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	EHF	Q9NZC4	300 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF580	Q9UK33	172 aa		12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	RBMX2	Q9Y388	322 aa	Known RBP	12.48	□□□□□ -0.41
GGA1-216	ENST00000460957	MGAM2	Q2M2H8	2515 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	FCN1	O00602	326 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	HPGDS	O60760	199 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF182	P17025	639 aa	Predicted RBP	12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	AADAC	P22760	399 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	TAS2R46	P59540	309 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	FXYD3	Q14802	87 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	CTF1	Q16619	201 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	TMEM177	Q53S58	311 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	OR2B11	Q5JQS5	317 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	ZNF562	Q6V9R5	426 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	SNX29P2	Q8IUI4	249 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	TCTEX1D1	Q8N7M0	179 aa		12.47	□□□□□ -0.41
GGA1-216	ENST00000460957	OR5H2	Q8NGV7	314 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms