RNA–Protein interactions for RNA: ENST00000460766.5

IMP4-208, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 1 (best)

Gene IMP4, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-208ENST00000460766 SDF2L1Q9HCN8 221 aa17.08■□□□□ 0.33
IMP4-208ENST00000460766 TUBG2Q9NRH3 451 aa17.08■□□□□ 0.33
IMP4-208ENST00000460766 MARCH11A6NNE9 402 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 IGLV1-44P01699 117 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 FTH1P19P0C7X4 201 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 PRDX2P32119 198 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 CTAG1AP78358 180 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 IGFL2Q6UWQ7 119 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 ZNF66Q6ZN08 573 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 HSD17B10Q99714 261 aaKnown RBP17.08■□□□□ 0.32
IMP4-208ENST00000460766 TMPRSS5Q9H3S3 457 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 PROCRQ9UNN8 238 aa17.08■□□□□ 0.32
IMP4-208ENST00000460766 DIDO1Q9BTC0 2240 aaKnown RBP17.08■□□□□ 0.32
IMP4-208ENST00000460766 DSPP15924 2871 aaKnown RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 ZNF891A8MT65 544 aaPredicted RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 CYB5R3P00387 301 aaPredicted RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 TFF3Q07654 80 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 MBNL2Q5VZF2 373 aaKnown RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 CIB3Q96Q77 187 aaPredicted RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 DUSP13Q9UII6 198 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 WASF3Q9UPY6 502 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 LAMP3Q9UQV4 416 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 ZFHX4Q86UP3 3567 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 PMS2P5A8MQ11 134 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 CLDN34H7C241 214 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 B2MP61769 119 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 PRR14LQ5THK1 2151 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 CENPVQ7Z7K6 275 aaPredicted RBP17.07■□□□□ 0.32
IMP4-208ENST00000460766 TCTEX1D1Q8N7M0 179 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 OR10G9Q8NGN4 311 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 OR10G7Q8NGN6 311 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 AGMATQ9BSE5 352 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 ASCL3Q9NQ33 180 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 DOK5Q9P104 306 aa17.07■□□□□ 0.32
IMP4-208ENST00000460766 C15orf65H3BRN8 121 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 TNFSF13O75888 250 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 TRGC2P03986 189 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 CD81P60033 236 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 MEF2BQ02080 365 aaPredicted RBP17.06■□□□□ 0.32
IMP4-208ENST00000460766 FFAR4Q5NUL3 377 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 C1orf87Q8N0U7 546 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 ZNF71Q9NQZ8 489 aaPredicted RBP17.06■□□□□ 0.32
IMP4-208ENST00000460766 FABP1P07148 127 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 EGR1P18146 543 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 DEFB109BQ30KR1 87 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 BHLHA15Q7RTS1 189 aaPredicted RBP17.06■□□□□ 0.32
IMP4-208ENST00000460766 PIP4P1Q86T03 277 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 STARD4Q96DR4 205 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 FAM210BQ96KR6 192 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 GNG12Q9UBI6 72 aa17.06■□□□□ 0.32
IMP4-208ENST00000460766 CACNA1DQ01668 2161 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 ADH4P08319 380 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 HOXA5P20719 270 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 GPR12P47775 334 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 WDR25Q64LD2 544 aaPredicted RBP17.05■□□□□ 0.32
IMP4-208ENST00000460766 NCR3LG1Q68D85 454 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 ZNF709Q8N972 641 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 SMIM7Q9BQ49 75 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 NPCDR1Q9BY65 106 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 MRPL37Q9BZE1 423 aaKnown RBP17.05■□□□□ 0.32
IMP4-208ENST00000460766 TMEM242Q9NWH2 141 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 DKK4Q9UBT3 224 aa17.05■□□□□ 0.32
IMP4-208ENST00000460766 CTXND1A0A1B0GTU2 59 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 MBP02144 154 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 PSMB3P49720 205 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 HTD2P86397 168 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 R3HDM4Q96D70 268 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 QTRT1Q9BXR0 403 aaKnown RBP17.04■□□□□ 0.32
IMP4-208ENST00000460766 AHRRA9YTQ3 701 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 FCGR3BO75015 233 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 MZT1Q08AG7 82 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 ADIRFQ15847 76 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 TRAT1Q6PIZ9 186 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 LRP11Q86VZ4 500 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 RPUSD4Q96CM3 377 aaKnown RBP17.04■□□□□ 0.32
IMP4-208ENST00000460766 SSX3Q99909 188 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 FAM234AQ9H0X4 552 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 GSN-AS1Q9NRJ2 163 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
IMP4-208ENST00000460766 CHD3Q12873 2000 aaKnown RBP17.04■□□□□ 0.32
IMP4-208ENST00000460766 IGKV1D-17A0A075B6S4 117 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BKO60814 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 IGHV3-13P01766 116 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 IGHV3-7P01780 117 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BJP06899 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BOP23527 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BBP33778 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BDP58876 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BCP62807 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 P2RY6Q15077 328 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST2H2BEQ16778 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.03■□□□□ 0.32
IMP4-208ENST00000460766 SSX9Q7RTT3 188 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 EDARADDQ8WWZ3 215 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BHQ93079 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BNQ99877 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 HIST1H2BMQ99879 126 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 IGHV3OR15-7A0A075B7D8 119 aa17.03■□□□□ 0.32
IMP4-208ENST00000460766 CDX1P47902 265 aaPredicted RBP17.03■□□□□ 0.32
IMP4-208ENST00000460766 ACTR3CQ9C0K3 210 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms