RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 H1FOOQ8IZA3 346 aaPredicted RBP18■□□□□ 0.47
PTPN4-208ENST00000460289 OR5H6Q8NGV6 325 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 G3V318 75 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 SPDEFO95238 335 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 IGKV1-16P04430 117 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 LINC00205P59089 165 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 CX3CL1P78423 397 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 LCNL1Q6ZST4 164 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 NUDCD2Q8WVJ2 157 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 YIPF6Q96EC8 236 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 SLC35D1Q9NTN3 355 aa17.99■□□□□ 0.47
PTPN4-208ENST00000460289 METTL1Q9UBP6 276 aaKnown RBP17.99■□□□□ 0.47
PTPN4-208ENST00000460289 FCN1O00602 326 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 TMEM267Q0VDI3 215 aaPredicted RBP17.98■□□□□ 0.47
PTPN4-208ENST00000460289 CBX3Q13185 183 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 FOXB2Q5VYV0 432 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 CNIH2Q6PI25 160 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 P2RX4Q99571 388 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 MCRIP2Q9BUT9 160 aaKnown RBP17.98■□□□□ 0.47
PTPN4-208ENST00000460289 GPR61Q9BZJ8 451 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 DIABLOQ9NR28 239 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 SPATA2Q9UM82 520 aa17.98■□□□□ 0.47
PTPN4-208ENST00000460289 TRAV18A0A075B6X5 111 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 CCL24O00175 119 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 IGLV1-40P01703 118 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 LGALS7P47929 136 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 ZNF562Q6V9R5 426 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 TCTEX1D1Q8N7M0 179 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 MINDY2Q8NBR6 621 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 SLC25A38Q96DW6 304 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 RAX2Q96IS3 184 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 ADTRPQ96IZ2 230 aa17.97■□□□□ 0.47
PTPN4-208ENST00000460289 PRB2P02812 416 aaPredicted RBP17.96■□□□□ 0.47
PTPN4-208ENST00000460289 RRASP10301 218 aa17.96■□□□□ 0.47
PTPN4-208ENST00000460289 CRIP2P52943 208 aaPredicted RBP17.96■□□□□ 0.47
PTPN4-208ENST00000460289 C4orf3Q8WVX3 66 aa17.96■□□□□ 0.47
PTPN4-208ENST00000460289 UBE2E2Q96LR5 201 aa17.96■□□□□ 0.47
PTPN4-208ENST00000460289 CLCC1Q96S66 551 aa17.96■□□□□ 0.47
PTPN4-208ENST00000460289 ANXA10Q9UJ72 324 aa17.96■□□□□ 0.47
PTPN4-208ENST00000460289 SSX5O60225 188 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 SLC22A5O76082 557 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 RPS19P39019 145 aaKnown RBP17.95■□□□□ 0.46
PTPN4-208ENST00000460289 LUMP51884 338 aaPredicted RBP17.95■□□□□ 0.46
PTPN4-208ENST00000460289 RTL8BQ17RB0 113 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 ECSCRQ19T08 205 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 MYOZ3Q8TDC0 251 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 ABHD5Q8WTS1 349 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 OR2W1Q9Y3N9 320 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 NUBP2Q9Y5Y2 271 aa17.95■□□□□ 0.46
PTPN4-208ENST00000460289 TRIM64CA6NLI5 447 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 TGFBR1P36897 503 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 RAB9AP51151 201 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 LSM3P62310 102 aaKnown RBP17.94■□□□□ 0.46
PTPN4-208ENST00000460289 NDPQ00604 133 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 AKIRIN2Q53H80 203 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 PPP1R27Q86WC6 154 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 DPF1Q92782 380 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 S100A16Q96FQ6 103 aaKnown RBP17.94■□□□□ 0.46
PTPN4-208ENST00000460289 DUX3Q96PT4 197 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 KLK15Q9H2R5 256 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 VSIG4Q9Y279 399 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 FBXO7Q9Y3I1 522 aa17.94■□□□□ 0.46
PTPN4-208ENST00000460289 SLC25A17O43808 307 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 CA2P00918 260 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 HLA-DQB1P01920 261 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 NFYAP23511 347 aaPredicted RBP17.93■□□□□ 0.46
PTPN4-208ENST00000460289 DUTP33316 252 aaKnown RBP17.93■□□□□ 0.46
PTPN4-208ENST00000460289 TMEM177Q53S58 311 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 C19orf54Q5BKX5 351 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 ZNF645Q8N7E2 425 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 ZNF491Q8N8L2 437 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 BVESQ8NE79 360 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 C5orf30Q96GV9 206 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 FOXA2Q9Y261 457 aaPredicted RBP17.93■□□□□ 0.46
PTPN4-208ENST00000460289 A3GALT2U3KPV4 340 aa17.93■□□□□ 0.46
PTPN4-208ENST00000460289 TGP01266 2768 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 A0A1W2PN81 502 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 J3QRK9 145 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 SHOXO15266 292 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 EGR2P11161 476 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-208ENST00000460289 CD40LGP29965 261 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 CHRNA7P36544 502 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 RAB25P57735 213 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 ARPC4P59998 168 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 KIAA0141Q14154 515 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-208ENST00000460289 DEFB136Q30KP8 78 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 PYHIN1Q6K0P9 492 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 BEST4Q8NFU0 473 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 HARBI1Q96MB7 349 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 AUNIPQ9H7T9 357 aa17.92■□□□□ 0.46
PTPN4-208ENST00000460289 AURKAIP1Q9NWT8 199 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-208ENST00000460289 IGLV2-23P01705 113 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 FXYD3Q14802 87 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 ACTBL2Q562R1 376 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 UBE2NLQ5JXB2 153 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 UNQ5815/PRO19632Q6UWF5 114 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 HOGA1Q86XE5 327 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 OR5M8Q8NGP6 311 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 DDB2Q92466 427 aa17.91■□□□□ 0.46
PTPN4-208ENST00000460289 ARPC1AQ92747 370 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms