RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GNB1P62873 340 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 PSG5Q15238 335 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 SRSF7Q16629 238 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP39-209ENST00000458268 OR2B11Q5JQS5 317 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 TMEM69Q5SWH9 247 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 CNIH2Q6PI25 160 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 NPBQ8NG41 125 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 SLC25A46Q96AG3 418 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 FLYWCH2Q96CP2 140 aaKnown RBP14.68□□□□□ -0.06
USP39-209ENST00000458268 DUX3Q96PT4 197 aa14.68□□□□□ -0.06
USP39-209ENST00000458268 TSNAXQ99598 290 aaKnown RBP14.68□□□□□ -0.06
USP39-209ENST00000458268 A0A0A6YYH2 397 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 A6NJ64 397 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 FCN1O00602 326 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 NDUFA3O95167 84 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 DIRAS3O95661 229 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 THBS3P49746 956 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 RTL8BQ17RB0 113 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 OXLD1Q5BKU9 147 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 PDPNQ86YL7 162 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 COMMD1Q8N668 190 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 HARBI1Q96MB7 349 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 FAM103A1Q9BTL3 118 aaKnown RBP14.67□□□□□ -0.06
USP39-209ENST00000458268 TOLLIPQ9H0E2 274 aa14.67□□□□□ -0.06
USP39-209ENST00000458268 MRPS7Q9Y2R9 242 aaKnown RBP14.67□□□□□ -0.06
USP39-209ENST00000458268 TRAV41A0A0B4J266 112 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 SHOXO15266 292 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 WIPF1O43516 503 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 CA2P00918 260 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 PRB2P02812 416 aaPredicted RBP14.66□□□□□ -0.06
USP39-209ENST00000458268 EIF4EP06730 217 aaKnown RBP14.66□□□□□ -0.06
USP39-209ENST00000458268 OR5H8P0DN80 308 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 TAS2R20P59543 309 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 NDPQ00604 133 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 DEFB136Q30KP8 78 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 TMEM65Q6PI78 240 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 GPR141Q7Z602 305 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 DCUN1D5Q9BTE7 237 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 TPSG1Q9NRR2 321 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 GAB2Q9UQC2 676 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 OR2W1Q9Y3N9 320 aa14.66□□□□□ -0.06
USP39-209ENST00000458268 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 A0A1W2PN81 502 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 XRCC3O43542 346 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 IGLL1P15814 213 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 CHRNA7P36544 502 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 FXYD4P59646 89 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 CX3CL1P78423 397 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 ZNF695Q8IW36 515 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 ZNF645Q8N7E2 425 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 GRPEL2Q8TAA5 225 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 CASTOR1Q8WTX7 329 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 SECTM1Q8WVN6 248 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 OR5B12Q96R08 314 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 FBXO7Q9Y3I1 522 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 NOTCH1P46531 2555 aa14.65□□□□□ -0.06
USP39-209ENST00000458268 FAM25AB3EWG3 89 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 FAM25CB3EWG5 89 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 FAM25GB3EWG6 89 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 TMEM127O75204 238 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 CRYZL1O95825 349 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 IGF1P05019 195 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 ELANEP08246 267 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 FCGR2CP31995 323 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 FOXE3Q13461 319 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 RNASE12Q5GAN4 147 aaKnown RBP14.64□□□□□ -0.07
USP39-209ENST00000458268 KCTD9Q7L273 389 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 HOGA1Q86XE5 327 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 ZFP57Q9NU63 452 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 NECAP2Q9NVZ3 263 aa14.64□□□□□ -0.07
USP39-209ENST00000458268 LINC00473A8K010 186 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 TNFSF12O43508 249 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 HPGDSO60760 199 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 GABARAPO95166 117 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 CNIH1O95406 144 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 AADACP22760 399 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 DUTP33316 252 aaKnown RBP14.63□□□□□ -0.07
USP39-209ENST00000458268 CBX5P45973 191 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 RORCP51449 518 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 UNQ5815/PRO19632Q6UWF5 114 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 PPP1R27Q86WC6 154 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 ANKRD13BQ86YJ7 626 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 SNX29P2Q8IUI4 249 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 TCTEX1D2Q8WW35 142 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 KCTD12Q96CX2 325 aaKnown RBP14.63□□□□□ -0.07
USP39-209ENST00000458268 ADTRPQ96IZ2 230 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 RNF5Q99942 180 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 TAS2R8Q9NYW2 309 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 MEGF8Q7Z7M0 2845 aa14.63□□□□□ -0.07
USP39-209ENST00000458268 SMIM31A0A1B0GVY4 71 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 FCGR3BO75015 233 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 SPDEFO95238 335 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 IGHG4P01861 327 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 HLA-DQB1P01920 261 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 CFHR3Q02985 330 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 SAMD5Q5TGI4 173 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 ZNF660Q6AZW8 331 aaPredicted RBP14.62□□□□□ -0.07
USP39-209ENST00000458268 ETV3LQ6ZN32 361 aa14.62□□□□□ -0.07
USP39-209ENST00000458268 TMEM17Q86X19 198 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms