RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 Q6ZR03 302 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 LRP11Q86VZ4 500 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 OR5B12Q96R08 314 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 KCNIP1Q9NZI2 227 aa16.44■□□□□ 0.22
CNEP1R1-203ENST00000458059 ELOA3CA0A087WX78 387 aaPredicted RBP16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 PPP5D1E7EU14 171 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 WISP2O76076 250 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 Q3ZCU0 254 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 RNFT1Q5M7Z0 435 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 VKORC1L1Q8N0U8 176 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 DERL1Q9BUN8 251 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 CDH20Q9HBT6 801 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 MSL2Q9HCI7 577 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 TRBV6-6A0A0A6YYG2 114 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 B4E171 279 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 GATCO43716 136 aaKnown RBP16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 AMBPP02760 352 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 SLC25A6P12236 298 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 DDTP30046 118 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 TSPAN7P41732 249 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 EDDM3BP56851 147 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 TBC1D28Q2M2D7 210 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 DTD1Q8TEA8 209 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 POM121Q96HA1 1249 aa16.43■□□□□ 0.22
CNEP1R1-203ENST00000458059 YKT6O15498 198 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 HBZP02008 142 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 LINC00596Q86U02 117 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 GTF3AQ92664 365 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 PINX1Q96BK5 328 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 GALMQ96C23 342 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 PKIBQ9C010 78 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 PATZ1Q9HBE1 687 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 MRPS18CQ9Y3D5 142 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 TECTAO75443 2155 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 KBTBD11O94819 623 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 SNRPCP09234 159 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 PSG7Q13046 419 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 FBXW9Q5XUX1 488 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 TMEM14EPQ6UXP3 125 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 OR10P1Q8NGE3 313 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 NINJ1Q92982 152 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 BDP1A6H8Y1 2624 aa16.42■□□□□ 0.22
CNEP1R1-203ENST00000458059 TRBV24-1A0A075B6N3 115 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 SMPD2O60906 423 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 BRWD1-AS2P59051 145 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 ARFGEF3Q5TH69 2177 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 GYPAP02724 150 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 PFN1P07737 140 aaKnown RBP16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 FABP6P51161 128 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 USF2Q15853 346 aaPredicted RBP16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 CYP2G1PQ6ZSU1 146 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 ZNF709Q8N972 641 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 PITPNC1Q9UKF7 332 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 HCFC1P51610 2035 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 LRRC30A6NM36 301 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 LINC00473A8K010 186 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 TSTD3H0UI37 97 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 MPLP40238 635 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 UBE2NP61088 152 aaKnown RBP16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 SLC10A1Q14973 349 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 H2BFWTQ7Z2G1 175 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 CNEP1R1Q8N9A8 125 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 P2RX4Q99571 388 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 ABI3Q9P2A4 366 aa16.41■□□□□ 0.22
CNEP1R1-203ENST00000458059 ATP5G3P48201 142 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 GNB2P62879 340 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 OR1P1Q8NH06 330 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 ARRDC1-AS1Q9H2J1 176 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 SPRR3Q9UBC9 169 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 POLDIP2Q9Y2S7 368 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 FAM78BQ5VT40 261 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 NPCDR1Q9BY65 106 aa16.4■□□□□ 0.22
CNEP1R1-203ENST00000458059 NPPCP23582 126 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 PMS2P11Q13670 270 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 DMRTC2Q8IXT2 367 aaPredicted RBP16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 ZNF645Q8N7E2 425 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 STRADBQ9C0K7 418 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 INTS1Q8N201 2190 aaKnown RBP16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 CTXND1A0A1B0GTU2 59 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 C11orf94C9JXX5 98 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 TMEM183AQ8IXX5 376 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 TMEM147Q9BVK8 224 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 SRD5A3Q9H8P0 318 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 HSPB7Q9UBY9 170 aa16.39■□□□□ 0.21
CNEP1R1-203ENST00000458059 SP1P08047 785 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 GZMBP10144 247 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 NDUFB7P17568 137 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 MSMO1Q15800 293 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 MOB1BQ7L9L4 216 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 TMEM242Q9NWH2 141 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 TNCP24821 2201 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 ERVK11-1P61568 191 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 OR13A1Q8NGR1 328 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 QTRT1Q9BXR0 403 aaKnown RBP16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 GP6Q9HCN6 339 aa16.38■□□□□ 0.21
CNEP1R1-203ENST00000458059 TMEM30CPA0ZSE6 113 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms