RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 DDB2Q92466 427 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 RITA1Q96K30 269 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 ZNF2Q9BSG1 426 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-215ENST00000457039 TINAGL1Q9GZM7 467 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-215ENST00000457039 TENM1Q9UKZ4 2725 aa11.25□□□□□ -0.61
SMPD4-215ENST00000457039 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 LINC00473A8K010 186 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 M0QYG6 137 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 M0QZK8 103 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 THBS3P49746 956 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 F2RL1P55085 397 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 TAS2R19P59542 299 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 Q8N9W7 124 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 OR8H1Q8NGG4 311 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 SECTM1Q8WVN6 248 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 FXYD6Q9H0Q3 95 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 BEX1Q9HBH7 125 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 CCL28Q9NRJ3 127 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 WASHC3Q9Y3C0 194 aa11.24□□□□□ -0.61
SMPD4-215ENST00000457039 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 IGKV1-16P04430 117 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 FXYD4P59646 89 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 HERV-K104P61576 105 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 RPL30P62888 115 aaKnown RBP11.23□□□□□ -0.61
SMPD4-215ENST00000457039 RNASE10Q5GAN6 216 aaKnown RBP11.23□□□□□ -0.61
SMPD4-215ENST00000457039 SPANXN2Q5MJ10 180 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 LHFPL1Q86WI0 220 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 ARRDC1Q8N5I2 433 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 NPBQ8NG41 125 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 OR4D10Q8NGI6 311 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 TRIM63Q969Q1 353 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 ADTRPQ96IZ2 230 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 RNF5Q99942 180 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 SRRQ9GZT4 340 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 SLC5A7Q9GZV3 580 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 SIGLEC9Q9Y336 463 aa11.23□□□□□ -0.61
SMPD4-215ENST00000457039 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 SH2D7A6NKC9 451 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-215ENST00000457039 NDUFA3O95167 84 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 APOA2P02652 100 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 CSF1P09603 554 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 ZNF735P0CB33 412 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 CNTFRP26992 372 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 GNRHRP30968 328 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 PROK1P58294 105 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 TSPAN5P62079 268 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
SMPD4-215ENST00000457039 ABCA11PQ4W5N1 156 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 AADACL3Q5VUY0 350 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 STEAP1BQ6NZ63 245 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 TMEM17Q86X19 198 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 ZBTB34Q8NCN2 500 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-215ENST00000457039 SLC35D1Q9NTN3 355 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 SERTAD4Q9NUC0 356 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 TAS2R8Q9NYW2 309 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 STAB1Q9NY15 2570 aa11.22□□□□□ -0.61
SMPD4-215ENST00000457039 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
SMPD4-215ENST00000457039 H7C2Y5 167 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 NBR2O15453 112 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 RAB3DO95716 219 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 BRWD1-AS2P59051 145 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 MMDQ15546 238 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 PYDC2Q56P42 97 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 ZNF66Q6ZN08 573 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 Q8N402 240 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 MFSD4AQ8N468 514 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 BVESQ8NE79 360 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 HSD17B10Q99714 261 aaKnown RBP11.21□□□□□ -0.61
SMPD4-215ENST00000457039 LIN7CQ9NUP9 197 aaKnown RBP11.21□□□□□ -0.61
SMPD4-215ENST00000457039 RNF114Q9Y508 228 aa11.21□□□□□ -0.61
SMPD4-215ENST00000457039 IFNA6P05013 189 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 AKAIN1P0CW23 69 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 RRASP10301 218 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 UCP3P55916 312 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 MEF2DQ14814 521 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 KCTD9Q7L273 389 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 OR4C16Q8NGL9 310 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
SMPD4-215ENST00000457039 GPHA2Q96T91 129 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-215ENST00000457039 PTTG2Q9NZH5 202 aa11.2□□□□□ -0.62
SMPD4-215ENST00000457039 TNFSF12O43508 249 aa11.19□□□□□ -0.62
SMPD4-215ENST00000457039 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms