RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ZNF383Q8NA42 475 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 DRAXINQ8NBI3 349 aaPredicted RBP13.93□□□□□ -0.18
MSH6-207ENST00000456246 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 K7EIL1 84 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 RAMP3O60896 148 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 IGKV1-16P04430 117 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 OR8U8P0C7N1 319 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 OR8U9P0C7N5 309 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 CD40LGP29965 261 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 LGALS7P47929 136 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 RAB9AP51151 201 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 KCTD21Q4G0X4 260 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 SFXN4Q6P4A7 337 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 OR11H1Q8NG94 326 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 DCSTAMPQ9H295 470 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 KLK15Q9H2R5 256 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 SLC35D1Q9NTN3 355 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 DAPK2Q9UIK4 370 aa13.92□□□□□ -0.18
MSH6-207ENST00000456246 RBM7Q9Y580 266 aaKnown RBP13.92□□□□□ -0.18
MSH6-207ENST00000456246 DNAH3Q8TD57 4116 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 A0A1W2PN81 502 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 I3L521 148 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 CTXN2P0C2S0 81 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 RRASP10301 218 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 CHRNA7P36544 502 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 DGCR2P98153 550 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 ZNF616Q08AN1 781 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 KIAA0141Q14154 515 aaPredicted RBP13.91□□□□□ -0.18
MSH6-207ENST00000456246 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 HACD4Q5VWC8 232 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 ADTRPQ96IZ2 230 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 SDHAF2Q9NX18 166 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
MSH6-207ENST00000456246 RRP15Q9Y3B9 282 aaKnown RBP13.91□□□□□ -0.18
MSH6-207ENST00000456246 FBXO7Q9Y3I1 522 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
MSH6-207ENST00000456246 SMIM30A4D0T7 59 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 TMEM127O75204 238 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 RTL8BQ17RB0 113 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 CDNFQ49AH0 187 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 ACTBL2Q562R1 376 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 MAFIPQ8WZ33 124 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 ARPC1AQ92747 370 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 GNB4Q9HAV0 340 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 ETV7Q9Y603 341 aa13.9□□□□□ -0.18
MSH6-207ENST00000456246 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 FCN1O00602 326 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 SLC25A17O43808 307 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 CA2P00918 260 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 EGR2P11161 476 aaPredicted RBP13.89□□□□□ -0.19
MSH6-207ENST00000456246 SDC2P34741 201 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 INSL3P51460 131 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 UNQ5815/PRO19632Q6UWF5 114 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 H1FOOQ8IZA3 346 aaPredicted RBP13.89□□□□□ -0.19
MSH6-207ENST00000456246 OR1N2Q8NGR9 330 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 LGALS14Q8TCE9 139 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 HARBI1Q96MB7 349 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 SLA2Q9H6Q3 261 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 A3GALT2U3KPV4 340 aa13.89□□□□□ -0.19
MSH6-207ENST00000456246 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 SOX15O60248 233 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 SLC22A5O76082 557 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 SNRPBP14678 240 aaKnown RBP13.88□□□□□ -0.19
MSH6-207ENST00000456246 GNG2P59768 71 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 TIMM50Q3ZCQ8 353 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 TMEM177Q53S58 311 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 TMEM68Q96MH6 324 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 CLCC1Q96S66 551 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 RHBDL2Q9NX52 303 aa13.88□□□□□ -0.19
MSH6-207ENST00000456246 A0A0A6YYH2 397 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 A6NJ64 397 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 H3BUA1 57 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 LGALS1P09382 135 aaKnown RBP13.87□□□□□ -0.19
MSH6-207ENST00000456246 CD36P16671 472 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 LINC00205P59089 165 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 FXYD3Q14802 87 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 NEDD8Q15843 81 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 DEFB121Q5J5C9 76 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 LFNGQ8NES3 379 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 ST6GALNAC5Q9BVH7 336 aa13.87□□□□□ -0.19
MSH6-207ENST00000456246 LOC100506127A0A0U1RQW1 187 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 TMEM235A6NFC5 223 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 ARPC1BO15143 372 aaKnown RBP13.86□□□□□ -0.19
MSH6-207ENST00000456246 SHOXO15266 292 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 CNIH1O95406 144 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 IGLV2-23P01705 113 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
MSH6-207ENST00000456246 GNB1P62873 340 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 VMA21Q3ZAQ7 101 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 ZNF260Q3ZCT1 412 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 CNIH2Q6PI25 160 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 ZNF645Q8N7E2 425 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 OR5B12Q96R08 314 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
MSH6-207ENST00000456246 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
MSH6-207ENST00000456246 ELF5Q9UKW6 265 aaPredicted RBP13.86□□□□□ -0.19
MSH6-207ENST00000456246 OR2W1Q9Y3N9 320 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms