RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 LIN7CQ9NUP9 197 aaKnown RBP22.21■■□□□ 1.15
SMARCC1-203ENST00000454240 GABARAPH6UMI1 98 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 H7C2Y5 167 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 CTDSPLO15194 276 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 RBBP9O75884 186 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 DUTP33316 252 aaKnown RBP22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 THBS3P49746 956 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 IL18Q14116 193 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 SHISA2Q6UWI4 295 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 NPBQ8NG41 125 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 RNF5Q99942 180 aa22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 RBMX2Q9Y388 322 aaKnown RBP22.2■■□□□ 1.14
SMARCC1-203ENST00000454240 APOA2P02652 100 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 CNTFRP26992 372 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 VDAC2P45880 294 aaPredicted RBP22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 DGCR2P98153 550 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 TAGLNQ01995 201 aaKnown RBP22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 MMDQ15546 238 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 TMEM95Q3KNT9 176 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 ARSJQ5FYB0 599 aaPredicted RBP22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 PDPNQ86YL7 162 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 DDB2Q92466 427 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 ADTRPQ96IZ2 230 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 WNT10AQ9GZT5 417 aa22.19■■□□□ 1.14
SMARCC1-203ENST00000454240 IGKV1-16P04430 117 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 SRSF4Q08170 494 aaKnown RBP22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 EIF4EBP1Q13541 118 aaPredicted RBP22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 MSMO1Q15800 293 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 C9orf152Q5JTZ5 239 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 SECTM1Q8WVN6 248 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 RASL11BQ9BPW5 248 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 SLC35D1Q9NTN3 355 aa22.18■■□□□ 1.14
SMARCC1-203ENST00000454240 FABP12A6NFH5 140 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 LINC00473A8K010 186 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 NBR2O15453 112 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 NDUFA3O95167 84 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 KLHDC1Q8N7A1 406 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 SMIM4Q8WVI0 70 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 CITED1Q99966 193 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 ZNF2Q9BSG1 426 aaPredicted RBP22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 CCL28Q9NRJ3 127 aa22.17■■□□□ 1.14
SMARCC1-203ENST00000454240 IGHG2P01859 326 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 FXYD4P59646 89 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 SSBP1Q04837 148 aaKnown RBP22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 ACTBL2Q562R1 376 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 VAX1Q5SQQ9 334 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 OR6F1Q8NGZ6 308 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 WIPF2Q8TF74 440 aaPredicted RBP22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 MOB3AQ96BX8 217 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 SLC5A7Q9GZV3 580 aa22.16■■□□□ 1.14
SMARCC1-203ENST00000454240 VSIG10L2P0DP72 767 aa22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 S100A5P33763 92 aa22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 HERV-K104P61576 105 aa22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 ZBTB34Q8NCN2 500 aa22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 BVESQ8NE79 360 aa22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 FLYWCH2Q96CP2 140 aaKnown RBP22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 ZNF107Q9UII5 783 aaPredicted RBP22.15■■□□□ 1.14
SMARCC1-203ENST00000454240 RRASP10301 218 aa22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 RPL30P62888 115 aaKnown RBP22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 C5orf64Q2M2E5 130 aa22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 TMEM229BQ8NBD8 167 aa22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 HSD17B10Q99714 261 aaKnown RBP22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 KIAA1456Q9P272 454 aa22.14■■□□□ 1.13
SMARCC1-203ENST00000454240 GSTZ1O43708 216 aaPredicted RBP22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 CD3DP04234 171 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 TBPP20226 339 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 TSPAN5P62079 268 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 RPS16P62249 146 aaKnown RBP22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 RTL8BQ17RB0 113 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 ZNF66Q6ZN08 573 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 SLC35E3Q7Z769 313 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 CCDC190Q86UF4 302 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 TMEM17Q86X19 198 aa22.13■■□□□ 1.13
SMARCC1-203ENST00000454240 LINC01548A6NM66 108 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 M0QYG6 137 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 RRHO14718 337 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 PEX14O75381 377 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 GNRHRP30968 328 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 TMEM177Q53S58 311 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 KCTD9Q7L273 389 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 MFSD4AQ8N468 514 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 TSNAXQ99598 290 aaKnown RBP22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 HSPB9Q9BQS6 159 aa22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 TINAGL1Q9GZM7 467 aaPredicted RBP22.12■■□□□ 1.13
SMARCC1-203ENST00000454240 A6NHS1 94 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 CD74P04233 296 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 TAS2R19P59542 299 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 PSG5Q15238 335 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 RNASE10Q5GAN6 216 aaKnown RBP22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 ZNF818PQ6ZRF7 136 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 FXYD6Q9H0Q3 95 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 FBXL15Q9H469 300 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 TAS2R8Q9NYW2 309 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 PRELID3BQ9Y3B1 194 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 V9GYH0 126 aa22.11■■□□□ 1.13
SMARCC1-203ENST00000454240 SPDEFO95238 335 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 HLA-DRB1P01911 266 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 LGALS7P47929 136 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 CBX3Q13185 183 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 LIN54Q6MZP7 749 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms