RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-215	ENST00000453724	THBS3	P49746	956 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	EIF2B2	P49770	351 aa	Known RBP	4.98	□□□□□ -1.61
RPE-215	ENST00000453724	DEFA1	P59665	94 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	DEFA3	P59666	94 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	CATR1	Q13166	79 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	MEF2D	Q14814	521 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	RNASE10	Q5GAN6	216 aa	Known RBP	4.98	□□□□□ -1.61
RPE-215	ENST00000453724	UTF1	Q5T230	341 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	LPCAT3	Q6P1A2	487 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	DHRS11	Q6UWP2	260 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	FAM131A	Q6UXB0	335 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	ZNF66	Q6ZN08	573 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	CMTM1	Q8IZ96	169 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724		Q8N2B8	174 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	TCTEX1D1	Q8N7M0	179 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.98	□□□□□ -1.61
RPE-215	ENST00000453724	TMEM229B	Q8NBD8	167 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	OR5AN1	Q8NGI8	311 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	OR6F1	Q8NGZ6	308 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	OR8U1	Q8NH10	309 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	OR52I2	Q8NH67	350 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	OR2T6	Q8NHC8	308 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	MOB3A	Q96BX8	217 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	ABHD14B	Q96IU4	210 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	CYYR1	Q96J86	154 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	DUX5	Q96PT3	197 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	ABHD1	Q96SE0	405 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	NABP2	Q9BQ15	211 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	SOST	Q9BQB4	213 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	ZNF251	Q9BRH9	671 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	AIFM2	Q9BRQ8	373 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	MRPL20	Q9BYC9	149 aa	Known RBP	4.98	□□□□□ -1.61
RPE-215	ENST00000453724	PRSS22	Q9GZN4	317 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	KIAA1456	Q9P272	454 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	RBMX2	Q9Y388	322 aa	Known RBP	4.98	□□□□□ -1.61
RPE-215	ENST00000453724	PRELID3B	Q9Y3B1	194 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	WASHC3	Q9Y3C0	194 aa		4.98	□□□□□ -1.61
RPE-215	ENST00000453724	CLPSL1	A2RUU4	121 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	MEIS3P1	A6NDR6	274 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724		H0YJW9	148 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724		M0R1X1	148 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	CREBL2	O60519	120 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	CD74	P04233	296 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	AKAIN1	P0CW23	69 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	PTHLH	P12272	177 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	NFYA	P23511	347 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	UCP3	P55916	312 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	TSPAN5	P62079	268 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	IFITM3	Q01628	133 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	LY6E	Q16553	131 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	RPL39P5	Q59GN2	51 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	KCTD9	Q7L273	389 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	CCDC190	Q86UF4	302 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	TMEM219	Q86XT9	240 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	LYSMD2	Q8IV50	215 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	SLC38A6	Q8IZM9	456 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	CADM3	Q8N126	398 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724		Q8N6K4	173 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	C5orf56	Q8N8D9	126 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	GDPD1	Q8N9F7	314 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	POC5	Q8NA72	575 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	BVES	Q8NE79	360 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	OSR1	Q8TAX0	266 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	CD300LF	Q8TDQ1	290 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	ZNF486	Q96H40	463 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	EAF1	Q96JC9	268 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	TSNAX	Q99598	290 aa	Known RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	PRRT1	Q99946	306 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	PARP12	Q9H0J9	701 aa	Known RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	TNFRSF19	Q9NS68	423 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	LIN7C	Q9NUP9	197 aa	Known RBP	4.97	□□□□□ -1.61
RPE-215	ENST00000453724	SDHAF2	Q9NX18	166 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	KLK11	Q9UBX7	282 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	ZNF580	Q9UK33	172 aa		4.97	□□□□□ -1.61
RPE-215	ENST00000453724	PIGBOS1	A0A0B4J2F0	54 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	ANKRD20A5P	A0PJZ0	165 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	DISC1	C4P0D8	188 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724		H7C2Y5	167 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	NBR2	O15453	112 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
RPE-215	ENST00000453724	PEX14	O75381	377 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	B3GALNT1	O75752	331 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	NDUFA3	O95167	84 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	RAB3D	O95716	219 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	PTTG1	O95997	202 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	HLA-DRB1	P01911	266 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	PMP2	P02689	132 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	FCER2	P06734	321 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	FGF2	P09038	288 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	CT45A6	P0DMU7	189 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	CT45A5	P0DMU8	189 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	CT45A7	P0DMV0	189 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	AADAC	P22760	399 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	PAX6	P26367	422 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	HLA-DMA	P28067	261 aa		4.96	□□□□□ -1.62
RPE-215	ENST00000453724	DUT	P33316	252 aa	Known RBP	4.96	□□□□□ -1.62
RPE-215	ENST00000453724	LGALS7	P47929	136 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms