RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SSX2Q16385 188 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 KCNIP4Q6PIL6 250 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-205ENST00000453386 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 WDYHV1Q96HA8 205 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 WASF3Q9UPY6 502 aa13.21□□□□□ -0.29
TRA2B-205ENST00000453386 C12orf77C9JDV5 145 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 GCGP01275 180 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 CELA3BP08861 270 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 CATR1Q13166 79 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 NINJ1Q92982 152 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 NOL4LQ96MY1 436 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-205ENST00000453386 OR6C3Q9NZP0 311 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 GTF3C1Q12789 2109 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 CER1O95813 267 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 HAND1O96004 215 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 LINC00205P59089 165 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-205ENST00000453386 AESQ08117 197 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 ZNF146Q15072 292 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 NANOS1Q8WY41 292 aaKnown RBP13.2□□□□□ -0.3
TRA2B-205ENST00000453386 C5orf30Q96GV9 206 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 NPPCP23582 126 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 MPLP40238 635 aa13.2□□□□□ -0.3
TRA2B-205ENST00000453386 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-205ENST00000453386 TMEM30CPA0ZSE6 113 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 GGCTO75223 188 aaKnown RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 PDGFBP01127 241 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 FOSL1P15407 271 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 PAX1P15863 534 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 CDC34P49427 236 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 CISD2Q8N5K1 135 aaKnown RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 BCL2L2Q92843 193 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
TRA2B-205ENST00000453386 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 HBZP02008 142 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 PPP1CBP62140 327 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 Q3ZCU0 254 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 TMEM105Q8N8V8 129 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 ZBTB34Q8NCN2 500 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 LURAP1Q96LR2 239 aa13.19□□□□□ -0.3
TRA2B-205ENST00000453386 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 TRAV38-1A0A0B4J264 116 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 WNT9BO14905 357 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 VENTXO95231 258 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 TFF1P04155 84 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 BRWD1-AS2P59051 145 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 MRGPRDQ8TDS7 321 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 CIB3Q96Q77 187 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-205ENST00000453386 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 ABI3Q9P2A4 366 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 DEFB108AA8MXU0 73 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 NDUFB4O95168 129 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 P0C879 139 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 GABRA2P47869 451 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 PDLIM4P50479 330 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 FBXW9Q5XUX1 488 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 RFESDQ8TAC1 157 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 C2orf88Q9BSF0 95 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 DDA1Q9BW61 102 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 PCSK5Q92824 1860 aa13.18□□□□□ -0.3
TRA2B-205ENST00000453386 IGHV3-43A0A0B4J1X8 118 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 IGHV3-43DP0DP04 118 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
TRA2B-205ENST00000453386 EDDM3BP56851 147 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 SLC10A1Q14973 349 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 FIP1L1Q6UN15 594 aaKnown RBP13.17□□□□□ -0.3
TRA2B-205ENST00000453386 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 TPRX1Q8N7U7 411 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 OBP2BQ9NPH6 170 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 KNTC1P50748 2209 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 CLDN14O95500 239 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 OR4A8P0C604 315 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 IL3RAP26951 378 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 ATP5G3P48201 142 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 PAX5Q02548 391 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 MRPL49Q13405 166 aaKnown RBP13.17□□□□□ -0.3
TRA2B-205ENST00000453386 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 TGIF2LXQ8IUE1 241 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 TRAPPC1Q9Y5R8 145 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 TRIOBPQ9H2D6 2365 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 SMPD2O60906 423 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 SELLP14151 372 aa13.17□□□□□ -0.3
TRA2B-205ENST00000453386 LPAL2Q16609 132 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms