RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 SSMEM1Q8WWF3 244 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 S100ZQ8WXG8 99 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 SLC5A7Q9GZV3 580 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF221Q9UK13 617 aa12.52□□□□□ -0.41
VCX3B-204ENST00000453306 A6NDX4 124 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 M0R1X1 148 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 IL3RAP26951 378 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 CD40LGP29965 261 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 TSPAN5P62079 268 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 LY6EQ16553 131 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 AANATQ16613 207 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 TMEM17Q86X19 198 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 ARRDC1Q8N5I2 433 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 DDB2Q92466 427 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 CHIAQ9BZP6 476 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 C1RLQ9NZP8 487 aa12.51□□□□□ -0.41
VCX3B-204ENST00000453306 CLPSL1A2RUU4 121 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 H0YJW9 148 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 CHST1O43916 411 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
VCX3B-204ENST00000453306 PI3P19957 117 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 DUTP33316 252 aaKnown RBP12.5□□□□□ -0.41
VCX3B-204ENST00000453306 BTCP35070 178 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 EBI3Q14213 229 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF57Q68EA5 555 aaPredicted RBP12.5□□□□□ -0.41
VCX3B-204ENST00000453306 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 Q8N6K4 173 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.5□□□□□ -0.41
VCX3B-204ENST00000453306 OR5AN1Q8NGI8 311 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 CAPSLQ8WWF8 208 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 CITED1Q99966 193 aa12.5□□□□□ -0.41
VCX3B-204ENST00000453306 RBM7Q9Y580 266 aaKnown RBP12.5□□□□□ -0.41
VCX3B-204ENST00000453306 TNFSF12O43508 249 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 IFNA6P05013 189 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 UCP3P55916 312 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 HERV-K104P61576 105 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 HNF4GQ14541 408 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 MEF2DQ14814 521 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 SCGB2B2Q4G0G5 96 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 THNSL2Q86YJ6 484 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 MARCH1Q8TCQ1 289 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 EAF1Q96JC9 268 aaPredicted RBP12.49□□□□□ -0.41
VCX3B-204ENST00000453306 S1PR3Q99500 378 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 CCDC32Q9BV29 185 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 GHITMQ9H3K2 345 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 PLSCR3Q9NRY6 295 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 TBC1D24Q9ULP9 559 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
VCX3B-204ENST00000453306 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
VCX3B-204ENST00000453306 IGKV1D-33P01593 117 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 IGKV1-33P01594 117 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 AMY1AP04745 511 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 CD1BP29016 333 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 BVESQ8NE79 360 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
VCX3B-204ENST00000453306 WDR12Q9GZL7 423 aaKnown RBP12.48□□□□□ -0.41
VCX3B-204ENST00000453306 DPAGT1Q9H3H5 408 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 RNF114Q9Y508 228 aa12.48□□□□□ -0.41
VCX3B-204ENST00000453306 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 UPK1BO75841 260 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 IGKV1-16P04430 117 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 CNTFRP26992 372 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 CCR6P51684 374 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 F2RL1P55085 397 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 RELBQ01201 579 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 MSMO1Q15800 293 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 PHLDA2Q53GA4 152 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 IDO2Q6ZQW0 420 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 Q6ZS46 218 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 VPREB3Q9UKI3 123 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 GPR132Q9UNW8 380 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 VSIG4Q9Y279 399 aa12.47□□□□□ -0.41
VCX3B-204ENST00000453306 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.41
VCX3B-204ENST00000453306 TXNL1O43396 289 aa12.46□□□□□ -0.41
VCX3B-204ENST00000453306 GPR137BO60478 399 aa12.46□□□□□ -0.41
VCX3B-204ENST00000453306 BRS3P32247 399 aa12.46□□□□□ -0.41
VCX3B-204ENST00000453306 AP3S2P59780 193 aa12.46□□□□□ -0.41
VCX3B-204ENST00000453306 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
VCX3B-204ENST00000453306 OR2B11Q5JQS5 317 aa12.46□□□□□ -0.41
VCX3B-204ENST00000453306 BTBD17A6NE02 478 aa12.45□□□□□ -0.42
VCX3B-204ENST00000453306 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
VCX3B-204ENST00000453306 GPR31O00270 319 aa12.45□□□□□ -0.42
VCX3B-204ENST00000453306 SLC22A5O76082 557 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms