RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 FAAP20Q6NZ36 180 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 ZNF497Q6ZNH5 498 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 OR10A7Q8NGE5 316 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 TERB2Q8NHR7 220 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 PPP1R14BQ96C90 147 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 GINS4Q9BRT9 223 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 HDHD3Q9BSH5 251 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-208ENST00000451893 PSG11Q9UQ72 335 aa17.26■□□□□ 0.35
C9orf3-208ENST00000451893 TRAV39A0A0B4J263 110 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 SH2D7A6NKC9 451 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-208ENST00000451893 PFDN1O60925 122 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 IL5P05113 134 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 GZMHP20718 246 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 TATDN3Q17R31 274 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 SAMD5Q5TGI4 173 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 REC114Q7Z4M0 266 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 CADM3Q8N126 398 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 MRPL30Q8TCC3 161 aaKnown RBP17.25■□□□□ 0.35
C9orf3-208ENST00000451893 RAB9BQ9NP90 201 aa17.25■□□□□ 0.35
C9orf3-208ENST00000451893 TSSC4Q9Y5U2 329 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-208ENST00000451893 TRAV6A0A075B6T7 132 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 TRDCB7Z8K6 153 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 SDCBPO00560 298 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-208ENST00000451893 DIRAS3O95661 229 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 TRAPPC2P0DI81 140 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 TRAPPC2BP0DI82 140 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 IL3RAP26951 378 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 SURF2Q15527 256 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-208ENST00000451893 DHRS11Q6UWP2 260 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 ZNF554Q86TJ5 538 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 OR8H3Q8N146 312 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 DRAM1Q8N682 238 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 OR6F1Q8NGZ6 308 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 CCDC107Q8WV48 283 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 ARL11Q969Q4 196 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 EHFQ9NZC4 300 aa17.24■□□□□ 0.35
C9orf3-208ENST00000451893 A0A1W2PPE3 182 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 C7orf66A4D0T2 115 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 LY6LH3BQJ8 138 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 PRB2P02812 416 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-208ENST00000451893 HNF4GQ14541 408 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 SCGB2B2Q4G0G5 96 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 OXLD1Q5BKU9 147 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 MOB3BQ86TA1 216 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 GPN1Q9HCN4 374 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-208ENST00000451893 TRAPPC2LQ9UL33 140 aa17.23■□□□□ 0.35
C9orf3-208ENST00000451893 NPIPB11E5RHQ5 1161 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 HSD17B6O14756 317 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 ARPC1BO15143 372 aaKnown RBP17.22■□□□□ 0.35
C9orf3-208ENST00000451893 OR5H8P0DN80 308 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 CGB3P0DN86 165 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 CGB7P0DN87 165 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 CD83Q01151 205 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 TRAT1Q6PIZ9 186 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 LHFPL1Q86WI0 220 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 THNSL2Q86YJ6 484 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 OR4A4PQ8NGN8 299 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 OR13C8Q8NGS7 320 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 WIPF2Q8TF74 440 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-208ENST00000451893 GIMAP1Q8WWP7 306 aa17.22■□□□□ 0.35
C9orf3-208ENST00000451893 MBNL3Q9NUK0 354 aaKnown RBP17.22■□□□□ 0.35
C9orf3-208ENST00000451893 IGKV1D-8A0A087WSZ0 117 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 PSMB11A5LHX3 300 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 FABP7O15540 132 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 IGKV1D-33P01593 117 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 IGKV1-33P01594 117 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 GAPDHP04406 335 aaKnown RBP17.21■□□□□ 0.35
C9orf3-208ENST00000451893 UTF1Q5T230 341 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 UBALD1Q8TB05 177 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 MRAPQ8TCY5 172 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 MAFIPQ8WZ33 124 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 KCNIP1Q9NZI2 227 aa17.21■□□□□ 0.35
C9orf3-208ENST00000451893 HMX3A6NHT5 357 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 SNRPGP15A8MWD9 76 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 SPINT2O43291 252 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 RLN1P04808 185 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 UBE2MP61081 183 aaKnown RBP17.2■□□□□ 0.34
C9orf3-208ENST00000451893 C6orf183Q5T699 404 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 PRR18Q8N4B5 295 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 CYYR1Q96J86 154 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 LINC00574Q9H8X3 128 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 GNG12Q9UBI6 72 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 SLC23A1Q9UHI7 598 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 ALG5Q9Y673 324 aa17.2■□□□□ 0.34
C9orf3-208ENST00000451893 IGHV3-43A0A0B4J1X8 118 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 A0A1W2PPI3 338 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 NCBP2LA6PVI3 153 aaKnown RBP17.19■□□□□ 0.34
C9orf3-208ENST00000451893 ADARB2-AS1A8MUL3 147 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 GSTT2P0CG29 244 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 IGHV3-43DP0DP04 118 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 REG1BP48304 166 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 TAS2R31P59538 309 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 SLC35B1P78383 322 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 HLA-DRB3P79483 266 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 FBLN7Q53RD9 439 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 ZNF660Q6AZW8 331 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-208ENST00000451893 GLDNQ6ZMI3 551 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-208ENST00000451893 FOXRED2Q8IWF2 684 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 GHITMQ9H3K2 345 aa17.19■□□□□ 0.34
C9orf3-208ENST00000451893 FLVCR2Q9UPI3 526 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms