RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC25A42Q86VD7 318 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-202ENST00000451053 DUX5Q96PT3 197 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 RTBDNQ9BSG5 229 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-202ENST00000451053 OR2D2Q9H210 308 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 C5orf66Q9H5L9 145 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 TNFRSF19Q9NS68 423 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 PIPOXQ9P0Z9 390 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 FLVCR2Q9UPI3 526 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 VGLL3A8MV65 326 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 OOSP1A8MZH6 123 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 H3BUX3 64 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 RAB29O14966 203 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 TCF21O43680 179 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 IFNA2P01563 188 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 OR4E1P0C645 316 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 ANXA3P12429 323 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 AKR1C4P17516 323 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
VPS33A-202ENST00000451053 RAB13P51153 203 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 PIGPP57054 158 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF816Q0VGE8 651 aaPredicted RBP10.49□□□□□ -0.73
VPS33A-202ENST00000451053 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 RPL39P5Q59GN2 51 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 GLDNQ6ZMI3 551 aaPredicted RBP10.49□□□□□ -0.73
VPS33A-202ENST00000451053 SGPP2Q8IWX5 399 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 BVESQ8NE79 360 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 PIFOQ8TCI5 191 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 SSMEM1Q8WWF3 244 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 RTN4IP1Q8WWV3 396 aaPredicted RBP10.49□□□□□ -0.73
VPS33A-202ENST00000451053 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 SSX3Q99909 188 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF251Q9BRH9 671 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 CCL28Q9NRJ3 127 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 GAB2Q9UQC2 676 aa10.49□□□□□ -0.73
VPS33A-202ENST00000451053 PIGBOS1A0A0B4J2F0 54 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 IGHV1-3A0A0C4DH29 117 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 TEX13DA0A0J9YY54 714 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-202ENST00000451053 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 TIMM23O14925 209 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-202ENST00000451053 B3GALNT1O75752 331 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 GAPDHP04406 335 aaKnown RBP10.48□□□□□ -0.73
VPS33A-202ENST00000451053 PI3P19957 117 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 CD24P25063 80 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 CATR1Q13166 79 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 AANATQ16613 207 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 PHLDA2Q53GA4 152 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 FBLN7Q53RD9 439 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 CCDC144NLQ6NUI1 221 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 FAM71F2Q6NXP2 309 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF818PQ6ZRF7 136 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF833PQ6ZTB9 187 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 KCTD9Q7L273 389 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 TGIF2LXQ8IUE1 241 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 DRAM1Q8N682 238 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 CFHR4Q92496 578 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 S1PR3Q99500 378 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 MRPL20Q9BYC9 149 aaKnown RBP10.48□□□□□ -0.73
VPS33A-202ENST00000451053 KCNIP3Q9Y2W7 256 aa10.48□□□□□ -0.73
VPS33A-202ENST00000451053 A0A0A6YYJ9 748 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 CRYM-AS1A6NIL9 109 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 PROP1O75360 226 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 VSIG10L2P0DP72 767 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 VAMP1P23763 118 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 DYNLT3P51808 116 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 UBA52P62987 128 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 DHODHQ02127 395 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 LY6EQ16553 131 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 LYG2Q86SG7 212 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 MOB3BQ86TA1 216 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 OR8H3Q8N146 312 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 ADAD2Q8NCV1 583 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 RBMXL1Q96E39 390 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 CHIAQ9BZP6 476 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 NAA60Q9H7X0 242 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 BEX1Q9HBH7 125 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 LIN7CQ9NUP9 197 aaKnown RBP10.47□□□□□ -0.73
VPS33A-202ENST00000451053 ALG5Q9Y673 324 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 POMT1Q9Y6A1 747 aa10.47□□□□□ -0.73
VPS33A-202ENST00000451053 BTBD17A6NE02 478 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 CLDN34H7C241 214 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 MPPED1O15442 326 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 PGLYRP1O75594 196 aaPredicted RBP10.46□□□□□ -0.73
VPS33A-202ENST00000451053 BRS3P32247 399 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 ARHGDIBP52566 201 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 SRPXP78539 464 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 CBX3Q13185 183 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 DHRS2Q13268 280 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 PPP1R1AQ13522 171 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.73
VPS33A-202ENST00000451053 TMEM86BQ8N661 226 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms