RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 GTF2F2P13984 249 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 ZNF44P15621 663 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 RAB6AP20340 208 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 CD40LGP29965 261 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 BLVRBP30043 206 aaPredicted RBP9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 MMDQ15546 238 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 MPV17LQ2QL34 196 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 IDNKQ5T6J7 187 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 MAPKAPK5-AS1Q8N8E1 139 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 CHST4Q8NCG5 386 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 OR51T1Q8NGJ9 327 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 OR5D18Q8NGL1 313 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 FAM3DQ96BQ1 224 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 SPACA5Q96QH8 159 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 URM1Q9BTM9 101 aaKnown RBP9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 WFDC10AQ9H1F0 79 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 SPACA1Q9HBV2 294 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 RABL2AQ9UBK7 228 aaPredicted RBP9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 RABL2BQ9UNT1 228 aa9.47□□□□□ -0.89
AC004540.1-204ENST00000449537 MEIKINA0A087WXM9 373 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 A0A0A6YYH2 397 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 A6NJ64 397 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 NPIPB11E5RHQ5 1161 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 HLA-DRB1P01911 266 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 IL3RAP26951 378 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 MECP2P51608 486 aaKnown RBP9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 SYNJ2BPP57105 145 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 OR10A3P58181 314 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 ATXN7L3Q14CW9 347 aaPredicted RBP9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 ARL6IP1Q15041 203 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 TATDN3Q17R31 274 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 PYHIN1Q6K0P9 492 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 LIN54Q6MZP7 749 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 GLIPR1L1Q6UWM5 242 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 TMEM217Q8N7C4 229 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 OR10A7Q8NGE5 316 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 OR13A1Q8NGR1 328 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 OR2K2Q8NGT1 345 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 RFT1Q96AA3 541 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 MS4A10Q96PG2 267 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 GFI1Q99684 422 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 TMEM59Q9BXS4 323 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 BARHL1Q9BZE3 327 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 IFT22Q9H7X7 185 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 AKIP1Q9NQ31 210 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 SLC23A1Q9UHI7 598 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 DAPK2Q9UIK4 370 aa9.46□□□□□ -0.9
AC004540.1-204ENST00000449537 METTL21EPA6NDL7 271 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 ZNF785A8K8V0 405 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 TMEM14DPA8MWL7 114 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 FAM25AB3EWG3 89 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 FAM25CB3EWG5 89 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 FAM25GB3EWG6 89 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 PTBP1P26599 531 aaKnown RBP eCLIP9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 BMI1P35226 326 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 ETV6P41212 452 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 KCNJ3P48549 501 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 RBM11P57052 281 aaKnown RBP9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 TPPP2P59282 170 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 TMEM267Q0VDI3 215 aaPredicted RBP9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 SLC22A6Q4U2R8 563 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 RAB12Q6IQ22 244 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 NR2C2APQ86WQ0 139 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 TCTEX1D1Q8N7M0 179 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 CCDC32Q9BV29 185 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 TM2D1Q9BX74 207 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 COMMD3Q9UBI1 195 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 RAB22AQ9UL26 194 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 SPATA2Q9UM82 520 aa9.45□□□□□ -0.9
AC004540.1-204ENST00000449537 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 IGKV1-12A0A0C4DH73 117 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 SMIM30A4D0T7 59 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 SLC33A1O00400 549 aaPredicted RBP9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 DEGS1O15121 323 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 CRTAPO75718 401 aaPredicted RBP9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 IGKV1D-12P01611 117 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 GLAP06280 429 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 MGMTP16455 207 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 SERPINA2P20848 420 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 PPP5CP53041 499 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 TCTAP57738 103 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 DEFA1P59665 94 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 DEFA3P59666 94 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 RPS27AP62979 156 aaKnown RBP9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 UBE2NLQ5JXB2 153 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 HES5Q5TA89 166 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 LGALS14Q8TCE9 139 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 DIRAS2Q96HU8 199 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 Q96M66 194 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 KIF25Q9UIL4 384 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 ING4Q9UNL4 249 aa9.44□□□□□ -0.9
AC004540.1-204ENST00000449537 LOC102724200A0A096LPH7 203 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms