RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 MIDNQ504T8 468 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 CYB5R2Q6BCY4 276 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 CIARTQ8N365 385 aaPredicted RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 C12orf45Q8N5I9 185 aaPredicted RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 COQ8AQ8NI60 647 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 C7orf69Q9H7B7 122 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 DPM3Q9P2X0 92 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TEX15Q9BXT5 2789 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 hCG_2014768A0A024R1R8 64 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 PIGBOS1A0A0B4J2F0 54 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 CENPVL3A0A0U1RRI6 287 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 CT45A6P0DMU7 189 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 CT45A5P0DMU8 189 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 CT45A7P0DMV0 189 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 RPA2P15927 270 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 SLC9A3R2Q15599 337 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 LDLRAD2Q5SZI1 272 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 LIAT1Q6ZQX7 453 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 CD300LFQ8TDQ1 290 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 LHX4Q969G2 390 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 IL22RA2Q969J5 263 aa15.62■□□□□ 0.09
RPS28-202ENST00000449223 LEUTXA8MZ59 168 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 OOSP1A8MZH6 123 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 HLA-GP17693 338 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 CEACAM3P40198 252 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 KIR2DS2P43631 304 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 SP6Q3SY56 376 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 ZNF585BQ52M93 769 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 TGIF2LXQ8IUE1 241 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 ZNF383Q8NA42 475 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 OR5AN1Q8NGI8 311 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 CASTOR1Q8WTX7 329 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 TCTEX1D2Q8WW35 142 aa15.61■□□□□ 0.09
RPS28-202ENST00000449223 HMX3A6NHT5 357 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 SSNA1O43805 119 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 DIAPH2-AS1Q14236 149 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 LGI3Q8N145 548 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 NABP2Q9BQ15 211 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 MED28Q9H204 178 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 PRELID3BQ9Y3B1 194 aa15.6■□□□□ 0.09
RPS28-202ENST00000449223 DUXBA0A1W2PPF3 345 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 GAPDHP04406 335 aaKnown RBP15.59■□□□□ 0.09
RPS28-202ENST00000449223 SULT1A3P0DMM9 295 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 SULT1A4P0DMN0 295 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 LINC00205P59089 165 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 HABP2Q14520 560 aaPredicted RBP15.59■□□□□ 0.09
RPS28-202ENST00000449223 TPTE2P1Q5T6R2 138 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 SPAG16Q8N0X2 631 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 DRAXINQ8NBI3 349 aaPredicted RBP15.59■□□□□ 0.09
RPS28-202ENST00000449223 LHFPL5Q8TAF8 219 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 RPEQ96AT9 228 aa15.59■□□□□ 0.09
RPS28-202ENST00000449223 MRPL20Q9BYC9 149 aaKnown RBP15.59■□□□□ 0.09
RPS28-202ENST00000449223 IGHV1-69DA0A0B4J2H0 117 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 RAMP3O60896 148 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 AVPP01185 164 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 IGHV1-69P01742 117 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 SERPINE2P07093 398 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 ZNF16P17020 682 aaPredicted RBP15.58■□□□□ 0.09
RPS28-202ENST00000449223 OR8H3Q8N146 312 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 RBPMSQ93062 196 aaKnown RBP15.58■□□□□ 0.09
RPS28-202ENST00000449223 AJUBAQ96IF1 538 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 C18orf12Q96KH6 178 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 RAB18Q9NP72 206 aa15.58■□□□□ 0.09
RPS28-202ENST00000449223 IGHV1-3A0A0C4DH29 117 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 A0A1W2PPI3 338 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 H0YJW9 148 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 NPFFO15130 113 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 RRASP10301 218 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 EPHA1P21709 976 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 SAA4P35542 130 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 LGALS4P56470 323 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 BPIFB3P59826 476 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 DHRS7BQ6IAN0 325 aaPredicted RBP15.58■□□□□ 0.08
RPS28-202ENST00000449223 LHFPL4Q7Z7J7 247 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 MALSU1Q96EH3 234 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 PLEKHA2Q9HB19 425 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 CELSR1Q9NYQ6 3014 aa15.58■□□□□ 0.08
RPS28-202ENST00000449223 TRAV40A0A0B4J280 105 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 HPRT1P00492 218 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 FSHBP01225 129 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 IGKV1-39P01597 117 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 IGKV1D-39P04432 117 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 REG1BP48304 166 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 FCN2Q15485 313 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 KLF17Q5JT82 389 aaPredicted RBP15.57■□□□□ 0.08
RPS28-202ENST00000449223 GPR157Q5UAW9 335 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 CCDC144NLQ6NUI1 221 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 PDZD9Q8IXQ8 264 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 SELENOHQ8IZQ5 122 aaKnown RBP15.57■□□□□ 0.08
RPS28-202ENST00000449223 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 OR11H7Q8NGC8 314 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 OR4S2Q8NH73 311 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 PRR13Q9NZ81 148 aa15.57■□□□□ 0.08
RPS28-202ENST00000449223 MC5RP33032 325 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 KRTAP1-1Q07627 177 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 RTL8BQ17RB0 113 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 TMEM268Q5VZI3 342 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 LIN54Q6MZP7 749 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 PDPNQ86YL7 162 aa15.56■□□□□ 0.08
RPS28-202ENST00000449223 ZNF695Q8IW36 515 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms