RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 M0R1X1 148 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SOCS1O15524 211 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SCTP09683 121 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SYNJ2BPP57105 145 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 UNC119Q13432 240 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 INSL4Q14641 139 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SPHARQ15513 63 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 HAGHQ16775 308 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 HAPLN4Q86UW8 402 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 Q8N402 240 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 ZNF383Q8NA42 475 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SNAPC3Q92966 411 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 CMSS1Q9BQ75 279 aaKnown RBP10.17□□□□□ -0.78
HMGB3-204ENST00000448905 CENPOQ9BU64 300 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 PARP12Q9H0J9 701 aaKnown RBP10.17□□□□□ -0.78
HMGB3-204ENST00000448905 SIGLEC8Q9NYZ4 499 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
HMGB3-204ENST00000448905 BIRC6Q9NR09 4857 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 DYNC2H1Q8NCM8 4307 aaKnown RBP10.16□□□□□ -0.78
HMGB3-204ENST00000448905 A0A0B4J203 849 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 PTGES3LE9PB15 166 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 AIREO43918 545 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 PROP1O75360 226 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 RRASP10301 218 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 CD37P11049 281 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 PSMD7P51665 324 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 QRFPP83859 136 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 TPBGQ13641 420 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 RPEL1Q2QD12 228 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 OR56B1Q8NGI3 324 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 CYYR1Q96J86 154 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 PHB2Q99623 299 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 TINAGL1Q9GZM7 467 aaPredicted RBP10.16□□□□□ -0.78
HMGB3-204ENST00000448905 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 SCN3BQ9NY72 215 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 COA4Q9NYJ1 87 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
HMGB3-204ENST00000448905 RBM7Q9Y580 266 aaKnown RBP10.16□□□□□ -0.78
HMGB3-204ENST00000448905 SHOXO15266 292 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 ARL6IP5O75915 188 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 JTBO76095 146 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 UCHL1P09936 223 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 MED22Q15528 200 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 TRAM1Q15629 374 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 RTL8BQ17RB0 113 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 ZNF343Q6P1L6 599 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 OR4A4PQ8NGN8 299 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 OR2K2Q8NGT1 345 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 OR10J5Q8NHC4 309 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
HMGB3-204ENST00000448905 VCXQ9H320 206 aa10.15□□□□□ -0.78
HMGB3-204ENST00000448905 MSGN1A6NI15 193 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 SLC17A2O00624 439 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 MPPED1O15442 326 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 OR2A4O95047 310 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 CDK1P06493 297 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 CD3GP09693 182 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 LINC00205P59089 165 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 P2RY14Q15391 338 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 RAB11BQ15907 218 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 IL34Q6ZMJ4 242 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 BVESQ8NE79 360 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 UFD1Q92890 307 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 ARHGAP5-AS1Q96IT6 56 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 PECRQ9BY49 303 aa10.14□□□□□ -0.79
HMGB3-204ENST00000448905 NKX1-2Q9UD57 310 aaPredicted RBP10.14□□□□□ -0.79
HMGB3-204ENST00000448905 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 A0A0A6YYD4 124 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 SHISA3A0PJX4 238 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 BET1O15155 118 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 FABP7O15540 132 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 ACTL6BO94805 426 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 TPPPO94811 219 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 CSN3P07498 182 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 GNAO1P09471 354 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 TMEM50BP56557 158 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 ATP5G2Q06055 141 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 C2orf76Q3KRA6 126 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 VMA21Q3ZAQ7 101 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 FAM209BQ5JX69 171 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 LAIR2Q6ISS4 152 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 TEX45Q8NA69 505 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 FBLIM1Q8WUP2 373 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 TMEM203Q969S6 136 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 ADTRPQ96IZ2 230 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 FKBP14Q9NWM8 211 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 SLC2A8Q9NY64 477 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
HMGB3-204ENST00000448905 DENRO43583 198 aaKnown RBP10.12□□□□□ -0.79
HMGB3-204ENST00000448905 CREBL2O60519 120 aaPredicted RBP10.12□□□□□ -0.79
HMGB3-204ENST00000448905 TUSC2O75896 110 aa10.12□□□□□ -0.79
HMGB3-204ENST00000448905 DIRAS3O95661 229 aa10.12□□□□□ -0.79
HMGB3-204ENST00000448905 CRYGBP07316 175 aa10.12□□□□□ -0.79
HMGB3-204ENST00000448905 OR9G9P0C7N8 305 aa10.12□□□□□ -0.79
HMGB3-204ENST00000448905 PSMA1P25786 263 aaKnown RBP10.12□□□□□ -0.79
HMGB3-204ENST00000448905 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms