RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 AIREO43918 545 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 WBP4O75554 376 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 HTR2CP28335 458 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 MOB1BQ7L9L4 216 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 DIMT1Q9UNQ2 313 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-203ENST00000448878 ZNF785A8K8V0 405 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 MPPED1O15442 326 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 PROP1O75360 226 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 NAPSAO96009 420 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 UBBP0CG47 229 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 RPS27AP62979 156 aaKnown RBP13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 ZNF880Q6PDB4 577 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 LAX1Q8IWV1 398 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 DDB2Q92466 427 aa13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 HDHD3Q9BSH5 251 aaPredicted RBP13.61□□□□□ -0.23
CHCHD3-203ENST00000448878 MSGN1A6NI15 193 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 SCTP09683 121 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 CELP19835 753 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 MECP2P51608 486 aaKnown RBP13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 TAS2R43P59537 309 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 HLA-DRB3P79483 266 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 CBX3Q13185 183 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 ZFP1Q6P2D0 407 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 HARBI1Q96MB7 349 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 KCNK15Q9H427 330 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 SELENOKQ9Y6D0 94 aa13.6□□□□□ -0.23
CHCHD3-203ENST00000448878 SHOXO15266 292 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 PRH1P02810 166 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 MAPK3P27361 379 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 ATP5G2Q06055 141 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 EXOSC2Q13868 293 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 PLECQ15149 4684 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 GLT8D1Q68CQ7 371 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 KCNG3Q8TAE7 436 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 RIMS4Q9H426 269 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 AK3Q9UIJ7 227 aa13.59□□□□□ -0.23
CHCHD3-203ENST00000448878 BMPR1BO00238 502 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 RBMXL2O75526 392 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 IGLV2-23P01705 113 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 RHOGP84095 191 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 TNXAQ16473 311 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 DEFB114Q30KQ6 69 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 THRSPQ92748 146 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 GGHQ92820 318 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 WDR89Q96FK6 387 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 FAM53CQ9NYF3 392 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 MGAT4AQ9UM21 535 aa13.58□□□□□ -0.24
CHCHD3-203ENST00000448878 TUSC2O75896 110 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 OR9G9P0C7N8 305 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 RBM48Q5RL73 367 aaKnown RBP13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 SLC16A13Q7RTY0 426 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 ACOT12Q8WYK0 555 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 PTX4Q96A99 478 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 RDH8Q9NYR8 311 aa13.57□□□□□ -0.24
CHCHD3-203ENST00000448878 SOCS1O15524 211 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 CRYGBP07316 175 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 FOLR2P14207 255 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 EDN2P20800 178 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 ST3GAL4Q11206 333 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 INSL4Q14641 139 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 ADAD2Q8NCV1 583 aaKnown RBP13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 KCTD12Q96CX2 325 aaKnown RBP13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 TM2D1Q9BX74 207 aa13.56□□□□□ -0.24
CHCHD3-203ENST00000448878 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 NUPR2A6NF83 97 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 FAM223BA6NKX1 122 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 MYL12BO14950 172 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 KIR2DS2P43631 304 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 UNC119Q13432 240 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 RTL8BQ17RB0 113 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 FAM223AQ8IWN6 122 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 ZNF485Q8NCK3 441 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 URM1Q9BTM9 101 aaKnown RBP13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 Q9N2K0 584 aa13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 ZNF230Q9UIE0 474 aaPredicted RBP13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 RBM7Q9Y580 266 aaKnown RBP13.55□□□□□ -0.24
CHCHD3-203ENST00000448878 A0A0A6YYD4 124 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 TRBV6-6A0A0A6YYG2 114 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 C2orf70A6NJV1 201 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 PPP5D1E7EU14 171 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 HLA-AP01891 365 aaKnown RBP13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 ACSM3Q53FZ2 586 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 C1orf100Q5SVJ3 147 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 IDO2Q6ZQW0 420 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 OR52B4Q8NGK2 314 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 CYGBQ8WWM9 190 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 SRSF12Q8WXF0 261 aaKnown RBP13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 CMSS1Q9BQ75 279 aaKnown RBP13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 GGTLC1Q9BX51 225 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 C12orf4Q9NQ89 552 aa13.54□□□□□ -0.24
CHCHD3-203ENST00000448878 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms