RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 PROP1O75360 226 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 DIRAS3O95661 229 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 GSTT2P0CG29 244 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 GSTT2BP0CG30 244 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 CRIP2P52943 208 aaPredicted RBP15.32■□□□□ 0.04
VCP-203ENST00000448530 KIAA0141Q14154 515 aaPredicted RBP15.32■□□□□ 0.04
VCP-203ENST00000448530 ACTBL2Q562R1 376 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 IGSF11Q5DX21 431 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 PYHIN1Q6K0P9 492 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 ZNF562Q6V9R5 426 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 SPARTQ8N0X7 666 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 CABLES2Q9BTV7 478 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 OR2D2Q9H210 308 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 SLC35D1Q9NTN3 355 aa15.32■□□□□ 0.04
VCP-203ENST00000448530 SMIM30A4D0T7 59 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 IGKV1-16P04430 117 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 ZNF260Q3ZCT1 412 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 UNQ5815/PRO19632Q6UWF5 114 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 MAFIPQ8WZ33 124 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 YTHDF1Q9BYJ9 559 aaKnown RBP15.31■□□□□ 0.04
VCP-203ENST00000448530 TOLLIPQ9H0E2 274 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 ZNF230Q9UIE0 474 aaPredicted RBP15.31■□□□□ 0.04
VCP-203ENST00000448530 SSR3Q9UNL2 185 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 NUBP2Q9Y5Y2 271 aa15.31■□□□□ 0.04
VCP-203ENST00000448530 TRBV6-7A0A0A0MS04 114 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 NOTOA8MTQ0 251 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 SLC25A17O43808 307 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 CA2P00918 260 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 FGF9P31371 208 aaPredicted RBP15.3■□□□□ 0.04
VCP-203ENST00000448530 ECI1P42126 302 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 LINC00205P59089 165 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 GNB1P62873 340 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 AKIRIN2Q53H80 203 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 C19orf54Q5BKX5 351 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 FAM103A1Q9BTL3 118 aaKnown RBP15.3■□□□□ 0.04
VCP-203ENST00000448530 TXNL4BQ9NX01 149 aaKnown RBP15.3■□□□□ 0.04
VCP-203ENST00000448530 STUB1Q9UNE7 303 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 GAB2Q9UQC2 676 aa15.3■□□□□ 0.04
VCP-203ENST00000448530 SOX15O60248 233 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 CNIH1O95406 144 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 EGR2P11161 476 aaPredicted RBP15.29■□□□□ 0.04
VCP-203ENST00000448530 LGALS7P47929 136 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 INSL3P51460 131 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 TAGLNQ01995 201 aaKnown RBP15.29■□□□□ 0.04
VCP-203ENST00000448530 TPRA1Q86W33 373 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 LFNGQ8NES3 379 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 CASTOR1Q8WTX7 329 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 ARPC1AQ92747 370 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 B9D2Q9BPU9 175 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 SDHAF2Q9NX18 166 aa15.29■□□□□ 0.04
VCP-203ENST00000448530 LGALS1P09382 135 aaKnown RBP15.28■□□□□ 0.04
VCP-203ENST00000448530 FXYD3Q14802 87 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 SRSF7Q16629 238 aaKnown RBP eCLIP15.28■□□□□ 0.04
VCP-203ENST00000448530 RTL8BQ17RB0 113 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 CDNFQ49AH0 187 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 VAX1Q5SQQ9 334 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 NR2C2APQ86WQ0 139 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 GRPEL2Q8TAA5 225 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 MS4A10Q96PG2 267 aa15.28■□□□□ 0.04
VCP-203ENST00000448530 LINC01619G3V211 115 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 OVOL1O14753 267 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 SCGNO76038 276 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 RRASP10301 218 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 DTYMKP23919 212 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 TPPP2P59282 170 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 Q6ZS49 121 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 DCUN1D4Q92564 292 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 ADTRPQ96IZ2 230 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 HARBI1Q96MB7 349 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 PRR25Q96S07 402 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 ALX4Q9H161 411 aaPredicted RBP15.27■□□□□ 0.04
VCP-203ENST00000448530 SLA2Q9H6Q3 261 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 TPSG1Q9NRR2 321 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 ZNF355PQ9NSJ1 428 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 DAPK2Q9UIK4 370 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 SCOCQ9UIL1 159 aa15.27■□□□□ 0.04
VCP-203ENST00000448530 COL7A1Q02388 2944 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 SHOXO15266 292 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 ASPHD1Q5U4P2 390 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 ZNF773Q6PK81 442 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 BVESQ8NE79 360 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 ST6GALNAC5Q9BVH7 336 aa15.26■□□□□ 0.03
VCP-203ENST00000448530 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.26■□□□□ 0.03
VCP-203ENST00000448530 RRP15Q9Y3B9 282 aaKnown RBP15.26■□□□□ 0.03
VCP-203ENST00000448530 LY86O95711 162 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 IGHV3-11P01762 117 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 TRGV3P03979 118 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 PITPNAQ00169 270 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 HACD4Q5VWC8 232 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 ZNF429Q86V71 674 aa15.25■□□□□ 0.03
VCP-203ENST00000448530 H1FOOQ8IZA3 346 aaPredicted RBP15.25■□□□□ 0.03
VCP-203ENST00000448530 ZNF256Q9Y2P7 627 aaPredicted RBP15.25■□□□□ 0.03
VCP-203ENST00000448530 CTXN2P0C2S0 81 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 SNRPBP14678 240 aaKnown RBP15.24■□□□□ 0.03
VCP-203ENST00000448530 SLURP1P55000 103 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 GNG2P59768 71 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 TMEM177Q53S58 311 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 C11orf87Q6NUJ2 197 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 SFXN4Q6P4A7 337 aa15.24■□□□□ 0.03
VCP-203ENST00000448530 DCSTAMPQ9H295 470 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms