RNA–Protein interactions for RNA: ENST00000447032.1

RBM17-206, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-206	ENST00000447032	HEXA-AS1	Q9H8Q6	139 aa		6.27	□□□□□ -1.41
RBM17-206	ENST00000447032	LIN7C	Q9NUP9	197 aa	Known RBP	6.27	□□□□□ -1.41
RBM17-206	ENST00000447032	HIF1AN	Q9NWT6	349 aa		6.27	□□□□□ -1.41
RBM17-206	ENST00000447032	PIPOX	Q9P0Z9	390 aa		6.27	□□□□□ -1.41
RBM17-206	ENST00000447032	GAB2	Q9UQC2	676 aa		6.27	□□□□□ -1.41
RBM17-206	ENST00000447032	RNF212B	A8MTL3	300 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	BUB1B-PAK6	H3BSN5	160 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	ARG1	P05089	322 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	SULT1A3	P0DMM9	295 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	SULT1A4	P0DMN0	295 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	ANXA3	P12429	323 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	ZNF16	P17020	682 aa	Predicted RBP	6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	GATA3	P23771	443 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	UCP1	P25874	307 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	IL3RA	P26951	378 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	REG1B	P48304	166 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	RRAS2	P62070	204 aa	Predicted RBP	6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	CATR1	Q13166	79 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	TMEM187	Q14656	261 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	FCN2	Q15485	313 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	OR2B11	Q5JQS5	317 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	LDLRAD2	Q5SZI1	272 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	LIN54	Q6MZP7	749 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	FAM71F2	Q6NXP2	309 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	C11orf88	Q6PI97	169 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	ZNF66	Q6ZN08	573 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	LHFPL5	Q8TAF8	219 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	GLYATL2	Q8WU03	294 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	TCTEX1D2	Q8WW35	142 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	DDB2	Q92466	427 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	LHX4	Q969G2	390 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	C18orf12	Q96KH6	178 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	S1PR3	Q99500	378 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	PHB2	Q99623	299 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	MRPL20	Q9BYC9	149 aa	Known RBP	6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	TMEM222	Q9H0R3	208 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	MED28	Q9H204	178 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	KCNIP3	Q9Y2W7	256 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	AUP1	Q9Y679	476 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	ATR	Q13535	2644 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	SVEP1	Q4LDE5	3571 aa		6.26	□□□□□ -1.41
RBM17-206	ENST00000447032	TRAV40	A0A0B4J280	105 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032		A0A0B4J2A0	478 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032		A0A1W2PRD5	423 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032		A0A1W2PRF3	423 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032		A0A1W2PRM7	423 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	HMX3	A6NHT5	357 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	DBX1	A6NMT0	343 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032		A8MV72	311 aa	Predicted RBP	6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	LY6L	H3BQJ8	138 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	RAMP3	O60896	148 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	B3GALNT1	O75752	331 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	TGFA	P01135	160 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	TRAPPC2	P0DI81	140 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	TRAPPC2B	P0DI82	140 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	CT45A6	P0DMU7	189 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	CT45A5	P0DMU8	189 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	CT45A7	P0DMV0	189 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	CXCL3	P19876	107 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	HTR1D	P28221	377 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	THBS3	P49746	956 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	GZMK	P49863	264 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	UBE2E1	P51965	193 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	BRWD1-AS2	P59051	145 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	SRPX	P78539	464 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	C2orf68	Q2NKX9	166 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	ZNF585B	Q52M93	769 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	TPTE2P1	Q5T6R2	138 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	LIAT1	Q6ZQX7	453 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	LHFPL4	Q7Z7J7	247 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	SPAG16	Q8N0X2	631 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	LRTM2	Q8N967	370 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	ZNF383	Q8NA42	475 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	UXS1	Q8NBZ7	420 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	OR11H7	Q8NGC8	314 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	SPATA3	Q8NHX4	192 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	COQ8A	Q8NI60	647 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	CHAC2	Q8WUX2	184 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	ADTRP	Q96IZ2	230 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	C7orf69	Q9H7B7	122 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	SHPK	Q9UHJ6	478 aa		6.25	□□□□□ -1.41
RBM17-206	ENST00000447032	NBEAL1	Q6ZS30	2694 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	FN1	P02751	2386 aa	Known RBP	6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	CENPVL3	A0A0U1RRI6	287 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032		A0A1W2PPI3	338 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	LEUTX	A8MZ59	168 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032		H0YJW9	148 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032		J3QLI3	93 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	CCS	O14618	274 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	GOSR2	O14653	212 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	SMAD7	O15105	426 aa	Known RBP	6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	RBFOX2	O43251	390 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	FCGR3B	O75015	233 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	ADAP1	O75689	374 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	S1PR2	O95136	353 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	CDS2	O95674	445 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	AVP	P01185	164 aa		6.24	□□□□□ -1.41
RBM17-206	ENST00000447032	IGKV1-39	P01597	117 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms