RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 ELK1P19419 428 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
HDAC4-204ENST00000446876 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
HDAC4-204ENST00000446876 SLC35B1P78383 322 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 PSG5Q15238 335 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 BVESQ8NE79 360 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 CLCC1Q96S66 551 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 OR51J1Q9H342 316 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
HDAC4-204ENST00000446876 MRPS7Q9Y2R9 242 aaKnown RBP11.65□□□□□ -0.54
HDAC4-204ENST00000446876 FBXO7Q9Y3I1 522 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 WSB1Q9Y6I7 421 aa11.65□□□□□ -0.54
HDAC4-204ENST00000446876 G3V318 75 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 SLC25A17O43808 307 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 TUSC2O75896 110 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 APOA1P02647 267 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 PF4V1P10720 104 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 AADACP22760 399 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 FCGR2CP31995 323 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
HDAC4-204ENST00000446876 CBX5P45973 191 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 THBS3P49746 956 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 CFHR3Q02985 330 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 SNX29P2Q8IUI4 249 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 ZNF645Q8N7E2 425 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 ACOT12Q8WYK0 555 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 DDB2Q92466 427 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 FLYWCH2Q96CP2 140 aaKnown RBP11.64□□□□□ -0.55
HDAC4-204ENST00000446876 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
HDAC4-204ENST00000446876 FAM25AB3EWG3 89 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 FAM25CB3EWG5 89 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 FAM25GB3EWG6 89 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 IGLV2-23P01705 113 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 IGF1P05019 195 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 RPLP1P05386 114 aaKnown RBP11.63□□□□□ -0.55
HDAC4-204ENST00000446876 OR5H8P0DN80 308 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 ZNF182P17025 639 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-204ENST00000446876 VDAC1P21796 283 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 RPL23AP62750 156 aaKnown RBP11.63□□□□□ -0.55
HDAC4-204ENST00000446876 OR2B11Q5JQS5 317 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 HARBI1Q96MB7 349 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 GPHA2Q96T91 129 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 TSNAXQ99598 290 aaKnown RBP11.63□□□□□ -0.55
HDAC4-204ENST00000446876 RNF5Q99942 180 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 NECAP2Q9NVZ3 263 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 ANAPC10Q9UM13 185 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 RBMX2Q9Y388 322 aaKnown RBP11.63□□□□□ -0.55
HDAC4-204ENST00000446876 A3GALT2U3KPV4 340 aa11.63□□□□□ -0.55
HDAC4-204ENST00000446876 CA2P00918 260 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 PRSS3P35030 304 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 RPL5P46777 297 aaKnown RBP11.62□□□□□ -0.55
HDAC4-204ENST00000446876 FXYD4P59646 89 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 RPL30P62888 115 aaKnown RBP11.62□□□□□ -0.55
HDAC4-204ENST00000446876 CX3CL1P78423 397 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 CDK10Q15131 360 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 RTL8BQ17RB0 113 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 RNASE12Q5GAN4 147 aaKnown RBP11.62□□□□□ -0.55
HDAC4-204ENST00000446876 MZT2AQ6P582 158 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 OR5AP2Q8NGF4 316 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 ABHD5Q8WTS1 349 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 AP3S1Q92572 193 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 CMTM3Q96MX0 182 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 FAM103A1Q9BTL3 118 aaKnown RBP11.62□□□□□ -0.55
HDAC4-204ENST00000446876 CCL28Q9NRJ3 127 aa11.62□□□□□ -0.55
HDAC4-204ENST00000446876 TRAV41A0A0B4J266 112 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 SMIM31A0A1B0GVY4 71 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 SRRM4A7MD48 611 aaKnown RBP11.61□□□□□ -0.55
HDAC4-204ENST00000446876 NUDT19A8MXV4 375 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 SHOXO15266 292 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 SPDEFO95238 335 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 CRYZL1O95825 349 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 PPYP01298 95 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 PMP2P02689 132 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 RFX2P48378 723 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 PJVKQ0ZLH3 352 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-204ENST00000446876 ETV3LQ6ZN32 361 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 C8orf86Q6ZUL3 223 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 KCTD9Q7L273 389 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 KLHL30-AS1Q8NEE0 82 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 GPX8Q8TED1 209 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 RAB2BQ8WUD1 216 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 ADTRPQ96IZ2 230 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 GON7Q9BXV9 100 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 TAS2R8Q9NYW2 309 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 EHFQ9NZC4 300 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 ZNF580Q9UK33 172 aa11.61□□□□□ -0.55
HDAC4-204ENST00000446876 G3V4G9 280 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 ARPC1BO15143 372 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms