RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 KLHL12Q53G59 568 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF678Q5SXM1 525 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 Q5W150 140 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 LCN8Q6JVE9 175 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 Q6ZRU5 148 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF101Q8IZC7 436 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR9I1Q8NGQ6 314 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR9A2Q8NGT5 310 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 C2orf15Q8WU43 125 aaKnown RBP2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR7D2Q96RA2 312 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 PECRQ9BY49 303 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 TMEM38BQ9NVV0 291 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 VPS29Q9UBQ0 182 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 LINC00527Q9UJ94 153 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 HDGFL3Q9Y3E1 203 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 SMG6Q86US8 1419 aaKnown RBP2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 CD163L1Q9NR16 1453 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 C5P01031 1676 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ITSN1Q15811 1721 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 KIF1BO60333 1816 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 WNK3Q9BYP7 1800 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 UBR3Q6ZT12 1888 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ARID1AO14497 2285 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 C5orf42Q9H799 3197 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF292O60281 2723 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ANKRD12Q6UB98 2062 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 DOCK8Q8NF50 2099 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SCN4AP35499 1836 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ADGRB1O14514 1584 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 NFAT5O94916 1531 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 FLT4P35916 1363 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 IGLV4-69A0A075B6H9 119 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ARGFXA6NJG6 315 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CLDN24A6NM45 220 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 FADS1O60427 444 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 POP7O75817 140 aaKnown RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF189O75820 626 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CCNE2O96020 404 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ALOX5APP20292 161 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CNTFRP26992 372 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SERPINB9P50453 376 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 EBPQ15125 230 aaKnown RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SPA17Q15506 151 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SP6Q3SY56 376 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 TRMT12Q53H54 448 aaKnown RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 MRPL2Q5T653 305 aaKnown RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 N4BP2L1Q5TBK1 243 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SFXN4Q6P4A7 337 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CCDC121Q6ZUS5 278 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 TCF23Q7RTU1 214 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 NT5DC3Q86UY8 548 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZBTB8OSQ8IWT0 167 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 NATD1Q8N6N6 113 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CLDN22Q8N7P3 220 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SPPL2BQ8TCT7 592 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 APOBEC3DQ96AK3 386 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 L3HYPDHQ96EM0 354 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 REEP6Q96HR9 211 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 SDHCQ99643 169 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 EBNA1BP2Q99848 306 aaKnown RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 RWDD2AQ9UIY3 292 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 MAST4O15021 2626 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZFHX2Q9C0A1 2572 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 LOXHD1Q8IVV2 1947 aa2.8□□□□□ -1.96
HMGB1P48-201ENST00000446155 CFAP47Q6ZTR5 3102 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 WDFY4Q6ZS81 3184 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 IGSF9BQ9UPX0 1349 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 C5orf49A4QMS7 147 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 GMNCA6NCL1 334 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 F5H5P2 479 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR7C2O60412 319 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 CCNKO75909 580 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 SERPINA1P01009 418 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 S100A2P29034 98 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 DDTP30046 118 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 TGFBR1P36897 503 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 PSMB3P49720 205 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF133P52736 654 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 RAB5BP61020 215 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 CASP8Q14790 479 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 ABCA11PQ4W5N1 156 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 FAM104BQ5XKR9 115 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 LAIR2Q6ISS4 152 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 NANOGP8Q6NSW7 305 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 CYHR1Q6ZMK1 362 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 NEGR1Q7Z3B1 354 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 TMEM75Q8N9X5 138 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR51H1Q8NH63 302 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR2V1Q8NHB1 315 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 GALMQ96C23 342 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 TMA16Q96EY4 203 aaKnown RBP2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 ACY3Q96HD9 319 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR52B2Q96RD2 323 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 GNB1LQ9BYB4 327 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 EIF5A2Q9GZV4 153 aaKnown RBP2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 GTSF1LQ9H1H1 148 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF430Q9H8G1 570 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 HES4Q9HCC6 221 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 ARL2BPQ9Y2Y0 163 aa2.79□□□□□ -1.96
HMGB1P48-201ENST00000446155 FASNP49327 2511 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms