RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 OR5H8P0DN80 308 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 PSMB8P28062 276 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 MYCNOSP40205 109 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 CDX1P47902 265 aaPredicted RBP11.53□□□□□ -0.56
USE1-202ENST00000445667 SCAND1P57086 179 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 DEFB136Q30KP8 78 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 ZNF660Q6AZW8 331 aaPredicted RBP11.53□□□□□ -0.56
USE1-202ENST00000445667 PDPNQ86YL7 162 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 FLYWCH2Q96CP2 140 aaKnown RBP11.53□□□□□ -0.56
USE1-202ENST00000445667 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 P2RX4Q99571 388 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 DCSTAMPQ9H295 470 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 ETV7Q9Y603 341 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 A3GALT2U3KPV4 340 aa11.53□□□□□ -0.56
USE1-202ENST00000445667 CCL24O00175 119 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 EGR2P11161 476 aaPredicted RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 NFYAP23511 347 aaPredicted RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 SLC6A1P30531 599 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 RPS19P39019 145 aaKnown RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 PITPNAQ00169 270 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 RCC1LQ96I51 464 aaKnown RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 TSNAXQ99598 290 aaKnown RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
USE1-202ENST00000445667 TPSG1Q9NRR2 321 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 NECAP2Q9NVZ3 263 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
USE1-202ENST00000445667 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 SLC25A17O43808 307 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 PTHLHP12272 177 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 RAB25P57735 213 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 TMEM65Q6PI78 240 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 MINDY2Q8NBR6 621 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 BVESQ8NE79 360 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 DIABLOQ9NR28 239 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
USE1-202ENST00000445667 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
USE1-202ENST00000445667 A0A1W2PN81 502 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 SOX15O60248 233 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 CA2P00918 260 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 FCER2P06734 321 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 CTXN2P0C2S0 81 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 CHRNA7P36544 502 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 RAB9AP51151 201 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 CRIP2P52943 208 aaPredicted RBP11.5□□□□□ -0.57
USE1-202ENST00000445667 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 PPP1R27Q86WC6 154 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 ZNF491Q8N8L2 437 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 MYOZ3Q8TDC0 251 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 OR5B12Q96R08 314 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 ANXA10Q9UJ72 324 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 OR2W1Q9Y3N9 320 aa11.5□□□□□ -0.57
USE1-202ENST00000445667 IGKV1D-13A0A0B4J2D9 117 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 LINC00473A8K010 186 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 SPDEFO95238 335 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 DUS4LO95620 317 aaKnown RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 IGKV1-13P0DP09 117 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 DUTP33316 252 aaKnown RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 LGALS7P47929 136 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 LUMP51884 338 aaPredicted RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 KRTAP10-11P60412 298 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 TMEM267Q0VDI3 215 aaPredicted RBP11.49□□□□□ -0.57
USE1-202ENST00000445667 PJVKQ0ZLH3 352 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 CROCCP3Q8IVE0 287 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 LFNGQ8NES3 379 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 BEST4Q8NFU0 473 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 C4orf3Q8WVX3 66 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 DDB2Q92466 427 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 HARBI1Q96MB7 349 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 FUNDC2Q9BWH2 189 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 AUNIPQ9H7T9 357 aa11.49□□□□□ -0.57
USE1-202ENST00000445667 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 A6NJ64 397 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
USE1-202ENST00000445667 SHOXO15266 292 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 TMEM127O75204 238 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 CRYGBP07316 175 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 NCS1P62166 190 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 TAGLNQ01995 201 aaKnown RBP11.48□□□□□ -0.57
USE1-202ENST00000445667 FXYD3Q14802 87 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 RTL8BQ17RB0 113 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 TMEM177Q53S58 311 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 REC114Q7Z4M0 266 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 OR11H1Q8NG94 326 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms