RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
MRPL40-202ENST00000443660 A0A1W2PPK0 400 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 FAM223BA6NKX1 122 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 MPPED1O15442 326 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 PROP1O75360 226 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 OR9G9P0C7N8 305 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 APELAP0DMC3 54 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 BMI1P35226 326 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 LINC00205P59089 165 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 RHOGP84095 191 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 EXOSC2Q13868 293 aaKnown RBP11.13□□□□□ -0.63
MRPL40-202ENST00000443660 C1orf146Q5VVC0 180 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 C6orf201Q7Z4U5 140 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 FAM223AQ8IWN6 122 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 SVOPQ8N4V2 548 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 TMEM217Q8N7C4 229 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
MRPL40-202ENST00000443660 EI24O14681 340 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 SPRY2O43597 315 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 CRYGBP07316 175 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 ETV1P50549 477 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 CBX3Q13185 183 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 FAM209BQ5JX69 171 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 OR2G6Q5TZ20 316 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 ADAD2Q8NCV1 583 aaKnown RBP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 PTX4Q96A99 478 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 UQCC2Q9BRT2 126 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 RIMS4Q9H426 269 aaPredicted RBP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 FGF20Q9NP95 211 aaPredicted RBP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 OR1A1Q9P1Q5 309 aa11.12□□□□□ -0.63
MRPL40-202ENST00000443660 ZNF230Q9UIE0 474 aaPredicted RBP11.12□□□□□ -0.63
MRPL40-202ENST00000443660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.11□□□□□ -0.63
MRPL40-202ENST00000443660 M0R1X1 148 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
MRPL40-202ENST00000443660 NAPSAO96009 420 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 CBLN1P23435 193 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 DCKP27707 260 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 MAP2K4P45985 399 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
MRPL40-202ENST00000443660 ZNF880Q6PDB4 577 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 Q6ZWC4 215 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 HARBI1Q96MB7 349 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 MGAT4AQ9UM21 535 aa11.11□□□□□ -0.63
MRPL40-202ENST00000443660 EXOSC1Q9Y3B2 195 aaKnown RBP11.11□□□□□ -0.63
MRPL40-202ENST00000443660 TRBV5-7A0A0A0MS05 114 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 LGALS9O00182 355 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 SHOXO15266 292 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 GGCTO75223 188 aaKnown RBP11.1□□□□□ -0.63
MRPL40-202ENST00000443660 UBBP0CG47 229 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 APOC4P55056 127 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
MRPL40-202ENST00000443660 TNXAQ16473 311 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 NKAIN3Q8N8D7 197 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
MRPL40-202ENST00000443660 SLC29A1Q99808 456 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 PLEKHJ1Q9NW61 149 aa11.1□□□□□ -0.63
MRPL40-202ENST00000443660 DYNC1I1O14576 645 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 OR2C1O95371 312 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 PRH1P02810 166 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 MYL12AP19105 171 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
MRPL40-202ENST00000443660 GLT8D1Q68CQ7 371 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 TMEM61Q8N0U2 210 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.09□□□□□ -0.63
MRPL40-202ENST00000443660 NECAP1Q8NC96 275 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 KCNG3Q8TAE7 436 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
MRPL40-202ENST00000443660 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 IRGMA1A4Y4 181 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 ZNF320A2RRD8 509 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 UBE2CO00762 179 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
MRPL40-202ENST00000443660 HLA-AP01891 365 aaKnown RBP11.08□□□□□ -0.64
MRPL40-202ENST00000443660 EDN2P20800 178 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 HTR2CP28335 458 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
MRPL40-202ENST00000443660 HLA-DRB3P79483 266 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 MED21Q13503 144 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 VMA21Q3ZAQ7 101 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 OR10K2Q6IF99 312 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 ZFP41Q8N8Y5 198 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 TEX45Q8NA69 505 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
MRPL40-202ENST00000443660 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 TMEM59Q9BXS4 323 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 RYR1P21817 5038 aa11.08□□□□□ -0.64
MRPL40-202ENST00000443660 KIAA1109Q2LD37 5005 aa11.07□□□□□ -0.64
MRPL40-202ENST00000443660 TRBV6-6A0A0A6YYG2 114 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms