RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PSMF1Q92530 271 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 TAF15Q92804 592 aaKnown RBP eCLIP11.93□□□□□ -0.5
MCF2L-218ENST00000442625 RNF150Q9ULK6 438 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 A0A0U1RQK1 487 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 NUPR1O60356 82 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 CLDN1O95832 211 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 CRYAAP02489 173 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 TDGF1P3P51864 188 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 SLC38A11Q08AI6 406 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 VWA1Q6PCB0 445 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 PPP1R32Q7Z5V6 425 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 MKXQ8IYA7 352 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 NOL4LQ96MY1 436 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-218ENST00000442625 SNHG12Q9BXW3 62 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 SLC10A1Q14973 349 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 Q6ZS49 121 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 OR5B12Q96R08 314 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 PAGE4O60829 102 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 KBTBD11O94819 623 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 PAX5Q02548 391 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 TFF3Q07654 80 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 TMEM164Q5U3C3 297 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 SHISA2Q6UWI4 295 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 BHLHA15Q7RTS1 189 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-218ENST00000442625 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 HES7Q9BYE0 225 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 ACTR3CQ9C0K3 210 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-218ENST00000442625 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 PILRBQ9UKJ0 227 aa11.92□□□□□ -0.5
MCF2L-218ENST00000442625 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SCGB1D1O95968 90 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 LINC00205P59089 165 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
MCF2L-218ENST00000442625 P2RX4Q99571 388 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A8PA6NJQ4 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A22PA8MWA6 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SIRPB1O00241 398 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SIAH2O43255 324 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 RAMP3O60896 148 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 GYPAP02724 150 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 RPLP1P05386 114 aaKnown RBP11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SELEP16581 610 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 NPPCP23582 126 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 GFRA1P56159 465 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
MCF2L-218ENST00000442625 MAFAQ8NHW3 353 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-218ENST00000442625 TMEM204Q9BSN7 226 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 SPXQ9BT56 116 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
MCF2L-218ENST00000442625 M0R143 59 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 KRASP01116 189 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 HBG1P69891 147 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 HBG2P69892 147 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 TCF23Q7RTU1 214 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 PYGO2Q9BRQ0 406 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 DLL3Q9NYJ7 618 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 TGOLN2O43493 480 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 IFNA1P01562 189 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 CYB561P49447 251 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 C3AR1Q16581 482 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
MCF2L-218ENST00000442625 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-218ENST00000442625 LOC400499M0QZD8 3231 aa11.9□□□□□ -0.51
MCF2L-218ENST00000442625 A6NNC1 897 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 FAM166BA8MTA8 275 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 K7EP13 123 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 HRASP01112 189 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 G6PCP35575 357 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 PSMB3P49720 205 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-218ENST00000442625 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 ZNF808Q8N4W9 903 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-218ENST00000442625 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
MCF2L-218ENST00000442625 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 507.1 ms