RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ECSCRQ19T08 205 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 ASPHD1Q5U4P2 390 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 SFXN4Q6P4A7 337 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 ZNF562Q6V9R5 426 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR11H1Q8NG94 326 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 DPF1Q92782 380 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR2D2Q9H210 308 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 RNF167Q9H6Y7 350 aa14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 METTL1Q9UBP6 276 aaKnown RBP14.7□□□□□ -0.06
HMGB3P22-201ENST00000442010 IGLV2-23P01705 113 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 DTYMKP23919 212 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 SDC2P34741 201 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 RAB25P57735 213 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 RPS16P62249 146 aaKnown RBP14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 PLGLAQ15195 96 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 CDNFQ49AH0 187 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 TMEM65Q6PI78 240 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 H1FOOQ8IZA3 346 aaPredicted RBP14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 TCTEX1D1Q8N7M0 179 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR5M8Q8NGP6 311 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 TSNAXQ99598 290 aaKnown RBP14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 DAPK2Q9UIK4 370 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 VSIG4Q9Y279 399 aa14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
HMGB3P22-201ENST00000442010 A0A1W2PN81 502 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CA2P00918 260 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 APOA2P02652 100 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CRYGBP07316 175 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CHRNA7P36544 502 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 GNB1P62873 340 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 SSBP2P81877 361 aaPredicted RBP14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 ZNF260Q3ZCT1 412 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 KCTD21Q4G0X4 260 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 AKIRIN2Q53H80 203 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 HACD4Q5VWC8 232 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 LGALS14Q8TCE9 139 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 FLYWCH2Q96CP2 140 aaKnown RBP14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CLCC1Q96S66 551 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 FAM103A1Q9BTL3 118 aaKnown RBP14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CENPOQ9BU64 300 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 TPSG1Q9NRR2 321 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 SLC35D1Q9NTN3 355 aa14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 FOXA2Q9Y261 457 aaPredicted RBP14.68□□□□□ -0.06
HMGB3P22-201ENST00000442010 CLEC2LP0C7M8 214 aa14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 TALDO1P37837 337 aa14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 LUMP51884 338 aaPredicted RBP14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 PPP1R27Q86WC6 154 aa14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 DDB2Q92466 427 aa14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 SCOCQ9UIL1 159 aa14.67□□□□□ -0.06
HMGB3P22-201ENST00000442010 ARPC1BO15143 372 aaKnown RBP14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 SLC25A17O43808 307 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 TMEM267Q0VDI3 215 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 NEDD8Q15843 81 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 TMEM177Q53S58 311 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR1N2Q8NGR9 330 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 CASTOR1Q8WTX7 329 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR5B12Q96R08 314 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 GINS4Q9BRT9 223 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 DCSTAMPQ9H295 470 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 A3GALT2U3KPV4 340 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 COL7A1Q02388 2944 aa14.66□□□□□ -0.06
HMGB3P22-201ENST00000442010 TMEM235A6NFC5 223 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 SRRM4A7MD48 611 aaKnown RBP14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 SSX5O60225 188 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 SCGNO76038 276 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 CD36P16671 472 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 DUTP33316 252 aaKnown RBP14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 LGALS7P47929 136 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 SCAND1P57086 179 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 TAGLNQ01995 201 aaKnown RBP14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 MXD1Q05195 221 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 ZNF616Q08AN1 781 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 MRGPRG-AS1Q2M3A8 158 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 ACTBL2Q562R1 376 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 C9orf66Q5T8R8 295 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 UNQ5815/PRO19632Q6UWF5 114 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 LFNGQ8NES3 379 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 OR5H6Q8NGV6 325 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 NUDCD2Q8WVJ2 157 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 SLC25A38Q96DW6 304 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 ST6GALNAC5Q9BVH7 336 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 RHBDL2Q9NX52 303 aa14.65□□□□□ -0.06
HMGB3P22-201ENST00000442010 LOC100506127A0A0U1RQW1 187 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 LINC00473A8K010 186 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 OR8U8P0C7N1 319 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 DGCR2P98153 550 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 PITPNAQ00169 270 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 FXYD3Q14802 87 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 PYHIN1Q6K0P9 492 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 BVESQ8NE79 360 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 ABHD5Q8WTS1 349 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 ARPC1AQ92747 370 aa14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 ALX4Q9H161 411 aaPredicted RBP14.64□□□□□ -0.07
HMGB3P22-201ENST00000442010 SEC14L6B5MCN3 397 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 RAMP3O60896 148 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 IGLV2-14P01704 120 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 PJVKQ0ZLH3 352 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 DEFB121Q5J5C9 76 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 HARBI1Q96MB7 349 aa14.63□□□□□ -0.07
HMGB3P22-201ENST00000442010 ZMAT5Q9UDW3 170 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms