RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ATP5SQ99766 215 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 AGMATQ9BSE5 352 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 HIPK2Q9H2X6 1198 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 CYTL1Q9NRR1 136 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 FKBP11Q9NYL4 201 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 PRNDQ9UKY0 176 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 A6NNC1 897 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 MARCH11A6NNE9 402 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 B8ZZF3 427 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 UMAD1C9J7I0 102 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 TXNL1O43396 289 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 IGKV1-39P01597 117 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 PRH1P02810 166 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 IGKV1D-39P04432 117 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 LIPFP07098 398 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 IAPPP10997 89 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 COL8A2P25067 703 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 MC5RP33032 325 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 SPCS3P61009 180 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 UBE2KP61086 200 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 GNB2P62879 340 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 TNFRSF9Q07011 255 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 ZNF273Q14593 569 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 C11orf71Q6IPW1 123 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 DUX4L9Q6RFH8 374 aaPredicted RBP4.96□□□□□ -1.61
VPS50-205ENST00000441602 LYPD2Q6UXB3 125 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 HSD17B13Q7Z5P4 300 aaPredicted RBP4.96□□□□□ -1.61
VPS50-205ENST00000441602 ZNF439Q8NDP4 499 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 VSTM2AQ8TAG5 236 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 PINX1Q96BK5 328 aaKnown RBP4.96□□□□□ -1.61
VPS50-205ENST00000441602 HSPB7Q9UBY9 170 aa4.96□□□□□ -1.61
VPS50-205ENST00000441602 SAA2-SAA4A0A096LPE2 208 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 IGSF23A1L1A6 192 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 ZNF705EA8MWA4 302 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 I3L521 148 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 CRYZL1O95825 349 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 FGF2P09038 288 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 SAA2P0DJI9 122 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 CAMLGP49069 296 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 EFNA4P52798 201 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 RPL39P5Q59GN2 51 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 AVPI1Q5T686 147 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 COMMD1Q8N668 190 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 OR13D1Q8NGV5 346 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 OR52E5Q8NH55 327 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 OSR1Q8TAX0 266 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 ZNF596Q8TC21 504 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 DTD1Q8TEA8 209 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 RBKSQ9H477 322 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 PATZ1Q9HBE1 687 aaKnown RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 KLF2Q9Y5W3 355 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 PPIAL4CA0A0B4J2A2 164 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 A0A0G2JRQ6 117 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 ANKRD34BA5PLL1 514 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 H7C2Y5 167 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 TRIM77I1YAP6 450 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 DANCRP0C864 163 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 PPIAL4GP0DN37 164 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 CCL3L1P16619 93 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 SULT1A2P50226 295 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 RAB11AP62491 216 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 CLINT1Q14677 625 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 CDSNQ15517 529 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 VMA21Q3ZAQ7 101 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 SPANXN5Q5MJ07 72 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 AKR1C8PQ5T2L2 129 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 WDR25Q64LD2 544 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 IL34Q6ZMJ4 242 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 TGIF2LYQ8IUE0 185 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 TGIF2LXQ8IUE1 241 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 OR5C1Q8NGR4 320 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 MARVELD3Q96A59 401 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 GINS3Q9BRX5 216 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 PCGF1Q9BSM1 259 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 CLEC7AQ9BXN2 247 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 TMEM133Q9H2Q1 129 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 BARX1Q9HBU1 254 aaPredicted RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 CTSZQ9UBR2 303 aa4.96□□□□□ -1.62
VPS50-205ENST00000441602 TLN1Q9Y490 2541 aaKnown RBP4.96□□□□□ -1.62
VPS50-205ENST00000441602 CEP295Q9C0D2 2601 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 PLCE1Q9P212 2302 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 A0A1W2PPE3 182 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LINC00473A8K010 186 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 KRBOX1C9JBD0 128 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 J3QR06 171 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 SHOXO15266 292 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 SLC31A2O15432 143 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 SOX15O60248 233 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 FBXO24O75426 580 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 TSPAN9O75954 239 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 NXPH3O95157 252 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 CEACAM3P40198 252 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 HOXA1P49639 335 aaPredicted RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 PDLIM4P50479 330 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 DYNLT3P51808 116 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ATP5IP56385 69 aaPredicted RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 TLE4Q04727 773 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 TCF23Q7RTU1 214 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 PDPNQ86YL7 162 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms