RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 BTN3A2P78410 334 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 GNA12Q03113 381 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 Q6ZRN7 208 aaPredicted RBP1.54□□□□□ -2.16
PFDN4-202ENST00000441080 SLC35E3Q7Z769 313 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 BAP18Q8IXM2 172 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 C1orf174Q8IYL3 243 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 LRRC34Q8IZ02 419 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 RIBC1Q8N443 379 aaPredicted RBP1.54□□□□□ -2.16
PFDN4-202ENST00000441080 CPNE2Q96FN4 548 aaPredicted RBP1.54□□□□□ -2.16
PFDN4-202ENST00000441080 NRBP2Q9NSY0 501 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 CD300AQ9UGN4 299 aa1.54□□□□□ -2.16
PFDN4-202ENST00000441080 DENND4BO75064 1496 aaPredicted RBP1.54□□□□□ -2.16
PFDN4-202ENST00000441080 MDC1Q14676 2089 aaKnown RBP1.54□□□□□ -2.16
PFDN4-202ENST00000441080 TRGV5A0A0B4J1U4 118 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 RFPL4AA6NLU0 287 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 RFPL4AL1F8VTS6 287 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 M0R381 172 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 EMP2P54851 167 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 TMEM33P57088 247 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 SNAP25P60880 206 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 RELAQ04206 551 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 TMED1Q13445 227 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
PFDN4-202ENST00000441080 C10orf126Q8N4M7 172 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 CLDND2Q8NHS1 167 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 MS4A6EQ96DS6 147 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 BBS2Q9BXC9 721 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 DOK5Q9P104 306 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 TP53TG1Q9Y2A0 90 aa1.53□□□□□ -2.16
PFDN4-202ENST00000441080 NCKAP5O14513 1909 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 TXNDC9O14530 226 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 CLDN12P56749 244 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 GNA13Q14344 377 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SDHAF4Q5VUM1 108 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SPATA12Q7Z6I5 190 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 COA5Q86WW8 74 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SPACA4Q8TDM5 124 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SMCR5Q8TEV8 140 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 ATP6V1G3Q96LB4 118 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SPZ1Q9BXG8 430 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 SPACA1Q9HBV2 294 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 HHLA3Q9XRX5 114 aa1.52□□□□□ -2.17
PFDN4-202ENST00000441080 ZNF532Q9HCE3 1301 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 NEMFO60524 1076 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 MT-CO2P00403 227 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 BPGMP07738 259 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 CXCL2P19875 107 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 CXCL3P19876 107 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 GABRA2P47869 451 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 RBM11P57052 281 aaKnown RBP1.51□□□□□ -2.17
PFDN4-202ENST00000441080 FABP5Q01469 135 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 LRRC28Q86X40 367 aaPredicted RBP1.51□□□□□ -2.17
PFDN4-202ENST00000441080 PACRGLQ8N7B6 248 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 SFRP2Q96HF1 295 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 DCUN1D5Q9BTE7 237 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 TIPINQ9BVW5 301 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 MRPL32Q9BYC8 188 aaKnown RBP1.51□□□□□ -2.17
PFDN4-202ENST00000441080 NSRP1Q9H0G5 558 aaKnown RBP1.51□□□□□ -2.17
PFDN4-202ENST00000441080 TAAR3PQ9P1P4 343 aa1.51□□□□□ -2.17
PFDN4-202ENST00000441080 PCYT1BQ9Y5K3 369 aaPredicted RBP1.51□□□□□ -2.17
PFDN4-202ENST00000441080 KDM5BQ9UGL1 1544 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 CR1P17927 2039 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 CHD2O14647 1828 aaKnown RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 TEX50A0A1B0GTY4 177 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 GOLGA6L10A6NI86 522 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 BHLHE40O14503 412 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 NPYP01303 97 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 ARL14EPLP0DKL9 152 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 RPL27AP46776 148 aaKnown RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 IDH3GP51553 393 aaPredicted RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 HOXC5Q00444 222 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 ZNF791Q3KP31 576 aaPredicted RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 CLEC6AQ6EIG7 209 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 DNM1P34Q6PK57 102 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 OR8B12Q8NGG6 310 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 SLC37A2Q8TED4 501 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 SLC22A4Q9H015 551 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 TMEM222Q9H0R3 208 aa1.5□□□□□ -2.17
PFDN4-202ENST00000441080 POLR3HQ9Y535 204 aaPredicted RBP1.5□□□□□ -2.17
PFDN4-202ENST00000441080 RIMS2Q9UQ26 1411 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 A0A1W2PP64 1363 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 OR6C6A6NF89 314 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 ATP8B1O43520 1251 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 NAPSAO96009 420 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 CD79BP40259 229 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 CCR2P41597 374 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 TMEM258P61165 79 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 GLO1Q04760 184 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 SLC38A11Q08AI6 406 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 EBPQ15125 230 aaKnown RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 LGALS9BQ3B8N2 356 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 CD302Q8IX05 232 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 OR7G1Q8NGA0 311 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 OR13C8Q8NGS7 320 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 RNASE6Q93091 150 aaKnown RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 C12orf43Q96C57 262 aaKnown RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 CFAP53Q96M91 514 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms