RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 FAM173AQ9BQD7 235 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 PLXNB1O43157 2135 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MED12LQ86YW9 2145 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 IL18BPO95998 194 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 CELA3BP08861 270 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 IER3P46695 156 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 KCNMB1Q16558 191 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR10G4Q8NGN3 311 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR10G9Q8NGN4 311 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR10G7Q8NGN6 311 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 PINX1Q96BK5 328 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 TRIB1Q96RU8 372 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 RIMS4Q9H426 269 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 SYNGR2O43760 224 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 IGKV1D-33P01593 117 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 IGKV1-33P01594 117 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 VDAC1P21796 283 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 CCL1P22362 96 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 CRYGSP22914 178 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 HOXC12P31275 282 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 CNN1P51911 297 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 FXYD3Q14802 87 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR4D5Q8NGN0 318 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 SF3B5Q9BWJ5 86 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 MTCH1Q9NZJ7 389 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 ATP23Q9Y6H3 246 aa8.43□□□□□ -1.06
CDC42SE1-202ENST00000439374 hCG_38984A0A1B0GV85 526 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 SLC25A6P12236 298 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 CMTM2Q8TAZ6 248 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 SGK494Q96LW2 274 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 DNAJC4Q9NNZ3 241 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 C11orf94C9JXX5 98 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 MT-CO3P00414 261 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 RPLP1P05386 114 aaKnown RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 FOXO1Q12778 655 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 VKORC1L1Q8N0U8 176 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR5P3Q8WZ94 311 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 GUCD1Q96NT3 240 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 CEP192Q8TEP8 1941 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 NTN3O00634 580 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 NKX2-8O15522 239 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 PGLYRP1O75594 196 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 GABRA2P47869 451 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 MDP1Q86V88 176 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 TAAR3PQ9P1P4 343 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 RPH3ALQ9UNE2 315 aa8.42□□□□□ -1.06
CDC42SE1-202ENST00000439374 NEURL1O76050 574 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 DKK1O94907 266 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 CD46P15529 392 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 LYPD6BQ8NI32 183 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 APOBEC3DQ96AK3 386 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 TP53TG5Q9Y2B4 290 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 SPAARA0A1B0GVQ0 90 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 KITLGP21583 273 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 IL3RAP26951 378 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 CFPP27918 469 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 LHX2P50458 406 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 PPP1CBP62140 327 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 ACSM6Q6P461 480 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 CRIP3Q6Q6R5 217 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 RAB24Q969Q5 203 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 TM2D1Q9BX74 207 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 OTOGLQ3ZCN5 2332 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 MDFIC2A0A1B0GVS7 189 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 FCN1O00602 326 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 WISP2O76076 250 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 IGHEP01854 428 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 AMTP48728 403 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 CD81P60033 236 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 HBG1P69891 147 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 HBG2P69892 147 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 Q6ZN92 141 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 FAM58AQ8N1B3 248 aa8.41□□□□□ -1.06
CDC42SE1-202ENST00000439374 KLRC4-KLRK1H3BQV0 150 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 SOX8P57073 446 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 LCN12Q6JVE5 192 aa8.4□□□□□ -1.06
CDC42SE1-202ENST00000439374 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms