RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR5H1A6NKK0 313 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 PMS2P5A8MQ11 134 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 C1QTNF9BB2RNN3 333 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 KBTBD11O94819 623 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 G6PCP35575 357 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 CEBPDP49716 269 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 NCR3LG1Q68D85 454 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 FIP1L1Q6UN15 594 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 SLC25A40Q8TBP6 338 aa13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 MRPL37Q9BZE1 423 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-203ENST00000439316 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
CLCNKA-203ENST00000439316 IDH3GP51553 393 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-203ENST00000439316 SLC35E4Q6ICL7 350 aa13.73□□□□□ -0.21
CLCNKA-203ENST00000439316 GALMQ96C23 342 aa13.73□□□□□ -0.21
CLCNKA-203ENST00000439316 PYGO2Q9BRQ0 406 aa13.73□□□□□ -0.21
CLCNKA-203ENST00000439316 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 S1PR2O95136 353 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 KRASP01116 189 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 MBP02144 154 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 GRPP07492 148 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 CD55P08174 381 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 ZNF816Q0VGE8 651 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PSG7Q13046 419 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 CATR1Q13166 79 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 ADIRFQ15847 76 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PDZD11Q5EBL8 140 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 OR52L2PQ8NGH6 319 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PRDM13Q9H4Q3 707 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 SLC25A22Q9H936 323 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 CLN8Q9UBY8 286 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PIEZO2Q9H5I5 2752 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 TRGV5A0A0B4J1U4 118 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 TRAV17A0A0B4J275 112 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 OOEPA6NGQ2 149 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PFN1P07737 140 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 RD3LP0DJH9 198 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 SELEP16581 610 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 IL2RGP31785 369 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PSMB3P49720 205 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 UBE2NP61088 152 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 ZNF808Q8N4W9 903 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 OR10A7Q8NGE5 316 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 PFDN5Q99471 154 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 SRD5A3Q9H8P0 318 aa13.72□□□□□ -0.21
CLCNKA-203ENST00000439316 CLDN14O95500 239 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 HBZP02008 142 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 FGF7P21781 194 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 IGHV1-2P23083 117 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 PLA2G5P39877 138 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 RPL23P62829 140 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 VWC2Q2TAL6 325 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 BSXQ3C1V8 233 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 C4orf17Q53FE4 359 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 C9orf152Q5JTZ5 239 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 LINC00469Q8N7U9 141 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 GMPPAQ96IJ6 420 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 ZDHHC11Q9H8X9 412 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 MANBALQ9NQG1 85 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 MSRB2Q9Y3D2 182 aa13.71□□□□□ -0.21
CLCNKA-203ENST00000439316 PTPRQQ9UMZ3 2332 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 C17orf98A8MV24 154 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 RAB29O14966 203 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 FABP4P15090 132 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 OR10P1Q8NGE3 313 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 OR4X1Q8NH49 305 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 DTD1Q8TEA8 209 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 RPUSD4Q96CM3 377 aaKnown RBP13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 COQ2Q96H96 371 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 SNX22Q96L94 193 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 PITPNC1Q9UKF7 332 aa13.71□□□□□ -0.22
CLCNKA-203ENST00000439316 WNT9BO14905 357 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 HMGB3O15347 200 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 MLNRO43193 412 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 ZG16O60844 167 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 MPV17P39210 176 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 TFF3Q07654 80 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 FFAR4Q5NUL3 377 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 TGIF2LYQ8IUE0 185 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 C11orf53Q8IXP5 236 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 NPCDR1Q9BY65 106 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 PARLQ9H300 379 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
CLCNKA-203ENST00000439316 COX5AP20674 150 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 MDKP21741 143 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 AESQ08117 197 aa13.69□□□□□ -0.22
CLCNKA-203ENST00000439316 HNF4GQ14541 408 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms