RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SLC25A46Q96AG3 418 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 KCTD12Q96CX2 325 aaKnown RBP19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 ADTRPQ96IZ2 230 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 OR2W1Q9Y3N9 320 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 SLC22A5O76082 557 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 RPLP1P05386 114 aaKnown RBP19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 RRASP10301 218 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 LUMP51884 338 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 LINC00205P59089 165 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 PSG5Q15238 335 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 RTL8BQ17RB0 113 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 AUNIPQ9H7T9 357 aa19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 METTL1Q9UBP6 276 aaKnown RBP19.39■□□□□ 0.69
RAPGEF1-206ENST00000438647 TRAV41A0A0B4J266 112 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 XRCC3O43542 346 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 NFYAP23511 347 aaPredicted RBP19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 CBX5P45973 191 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 LGALS7P47929 136 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 ARPC4P59998 168 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 NCS1P62166 190 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 BEAN1Q3B7T3 259 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 PDLIM3Q53GG5 364 aaPredicted RBP19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 C8orf86Q6ZUL3 223 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 ZNF645Q8N7E2 425 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 SAMD12Q8N8I0 201 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 BEST4Q8NFU0 473 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 WSB1Q9Y6I7 421 aa19.38■□□□□ 0.69
RAPGEF1-206ENST00000438647 SMIM18P0DKX4 95 aa19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 PSMB8P28062 276 aa19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 PPIFP30405 207 aaKnown RBP19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 CDX1P47902 265 aaPredicted RBP19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 CX3CL1P78423 397 aa19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 OXLD1Q5BKU9 147 aa19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 KPRPQ5T749 579 aaPredicted RBP19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 TCTEX1D1Q8N7M0 179 aa19.37■□□□□ 0.69
RAPGEF1-206ENST00000438647 G3V318 75 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 DUS4LO95620 317 aaKnown RBP19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 HLA-DQB1P01920 261 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 MYCNOSP40205 109 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 CRIP2P52943 208 aaPredicted RBP19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 VBP1P61758 197 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 TMEM267Q0VDI3 215 aaPredicted RBP19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 TMEM65Q6PI78 240 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 ZNF562Q6V9R5 426 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 HOGA1Q86XE5 327 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 ABHD5Q8WTS1 349 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 C5orf30Q96GV9 206 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 RCC1LQ96I51 464 aaKnown RBP19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 HARBI1Q96MB7 349 aa19.36■□□□□ 0.69
RAPGEF1-206ENST00000438647 J3QRK9 145 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 SLC25A17O43808 307 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 DUTP33316 252 aaKnown RBP19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 NDPQ00604 133 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 ECSCRQ19T08 205 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 TMEM69Q5SWH9 247 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 ETV3LQ6ZN32 361 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 LCNL1Q6ZST4 164 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 C18orf65Q6ZTR6 163 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 GVQW1Q8N7I0 195 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 LINC00482Q8N8I6 264 aa19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 MRPS26Q9BYN8 205 aaKnown RBP19.35■□□□□ 0.69
RAPGEF1-206ENST00000438647 FCN1O00602 326 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 SHOXO15266 292 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 TMEM177Q53S58 311 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 ANKRD13BQ86YJ7 626 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 MRPL41Q8IXM3 137 aaKnown RBP19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 MINDY2Q8NBR6 621 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 BVESQ8NE79 360 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 CLCC1Q96S66 551 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 NECAP2Q9NVZ3 263 aa19.34■□□□□ 0.69
RAPGEF1-206ENST00000438647 TUSC2O75896 110 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 CA2P00918 260 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGLV1-40P01703 118 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGLL1P15814 213 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 PPP1R27Q86WC6 154 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 ACOT12Q8WYK0 555 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 DDB2Q92466 427 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 CMTM3Q96MX0 182 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 IFT46Q9NQC8 304 aa19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 FOXA2Q9Y261 457 aaPredicted RBP19.33■□□□□ 0.68
RAPGEF1-206ENST00000438647 GABARAPO95166 117 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 MYOZ3Q8TDC0 251 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 C4orf3Q8WVX3 66 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 P2RX4Q99571 388 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 GPR61Q9BZJ8 451 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 COMMD3Q9UBI1 195 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 RBMX2Q9Y388 322 aaKnown RBP19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 PRELID3BQ9Y3B1 194 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 FBXO7Q9Y3I1 522 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 NUBP2Q9Y5Y2 271 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 A3GALT2U3KPV4 340 aa19.32■□□□□ 0.68
RAPGEF1-206ENST00000438647 A0A1W2PN81 502 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 LINC00473A8K010 186 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 CCL24O00175 119 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGLV2-23P01705 113 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 PTHLHP12272 177 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 CHRNA7P36544 502 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 RORCP51449 518 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 TAS2R20P59543 309 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 AKIRIN2Q53H80 203 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms