RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 IGKV1-33P01594 117 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
CALD1-209ENST00000436461 SLC6A1P30531 599 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 IER3P46695 156 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 HNF4GQ14541 408 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 RBMS2Q15434 407 aaKnown RBP13.47□□□□□ -0.25
CALD1-209ENST00000436461 ABCA11PQ4W5N1 156 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 LPCAT3Q6P1A2 487 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 TMED4Q7Z7H5 227 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 TBC1D26Q86UD7 250 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 ESM1Q9NQ30 184 aa13.47□□□□□ -0.25
CALD1-209ENST00000436461 FAM240BA0A1B0GVZ2 78 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 VGLL3A8MV65 326 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 H7C2Y5 167 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 PEX14O75381 377 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 NDUFB6O95139 128 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 VENTXO95231 258 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 THBS3P49746 956 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 BRWD1-AS2P59051 145 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 SRSF2Q01130 221 aaKnown RBP13.46□□□□□ -0.25
CALD1-209ENST00000436461 HES1Q14469 280 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 HABP2Q14520 560 aaPredicted RBP13.46□□□□□ -0.25
CALD1-209ENST00000436461 MZT2BQ6NZ67 158 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 TMEM219Q86XT9 240 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 ZBTB34Q8NCN2 500 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 ZFAND1Q8TCF1 268 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 DDB2Q92466 427 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 TMEM230Q96A57 120 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 RITA1Q96K30 269 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 DPAGT1Q9H3H5 408 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 PRDM13Q9H4Q3 707 aa13.46□□□□□ -0.25
CALD1-209ENST00000436461 C14orf166Q9Y224 244 aaKnown RBP13.46□□□□□ -0.25
CALD1-209ENST00000436461 TRAV6A0A075B6T7 132 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 FCGR3BO75015 233 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 IGKV1-16P04430 117 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 BRS3P32247 399 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 ECI1P42126 302 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 ARHGDIBP52566 201 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 DCTN2Q13561 401 aaKnown RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 SURF2Q15527 256 aaPredicted RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 MSMO1Q15800 293 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 CCBE1Q6UXH8 406 aaPredicted RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 RBMS3Q6XE24 437 aaKnown RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 ZNF66Q6ZN08 573 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 OR5AN1Q8NGI8 311 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 HSD17B10Q99714 261 aaKnown RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 SLC25A21Q9BQT8 299 aaPredicted RBP13.46□□□□□ -0.26
CALD1-209ENST00000436461 SLC35D1Q9NTN3 355 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 COPZ2Q9P299 210 aa13.46□□□□□ -0.26
CALD1-209ENST00000436461 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 ARPC1BO15143 372 aaKnown RBP13.45□□□□□ -0.26
CALD1-209ENST00000436461 RAMP3O60896 148 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 TCRBP04435 133 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 AKR1C4P17516 323 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 DEFA1P59665 94 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 DEFA3P59666 94 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 SCGB2A2Q13296 93 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 ZDHHC22Q8N966 263 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 ENKURQ8TC29 256 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
CALD1-209ENST00000436461 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 BEX1Q9HBH7 125 aa13.45□□□□□ -0.26
CALD1-209ENST00000436461 DNAJC9-AS1A6NH13 148 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 MPPED1O15442 326 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 SPNP16150 400 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 CNTFRP26992 372 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 CD1BP29016 333 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 SLC9A3R2Q15599 337 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
CALD1-209ENST00000436461 NUDT15Q9NV35 164 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 TCF19Q9Y242 345 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 WASHC3Q9Y3C0 194 aa13.44□□□□□ -0.26
CALD1-209ENST00000436461 CRYZL1O95825 349 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 APOA2P02652 100 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 ANXA7P20073 488 aaKnown RBP13.43□□□□□ -0.26
CALD1-209ENST00000436461 DYNLT3P51808 116 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 RAB25P57735 213 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 RND3P61587 244 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 CATR1Q13166 79 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 SP6Q3SY56 376 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 SPAG16Q8N0X2 631 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 ZNF418Q8TF45 676 aaPredicted RBP13.43□□□□□ -0.26
CALD1-209ENST00000436461 SSMEM1Q8WWF3 244 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 ADTRPQ96IZ2 230 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 SCGB3A2Q96PL1 93 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 TP53RKQ96S44 253 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 CHIAQ9BZP6 476 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 PALMDQ9NP74 551 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 PRR13Q9NZ81 148 aa13.43□□□□□ -0.26
CALD1-209ENST00000436461 TMEM11P17152 192 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 F2RP25116 425 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 CENPSQ8N2Z9 138 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 CCDC71LQ8N9Z2 235 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 PRELID3BQ9Y3B1 194 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 TEX13DA0A0J9YY54 714 aaPredicted RBP13.42□□□□□ -0.26
CALD1-209ENST00000436461 A6NDX4 124 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 CRYM-AS1A6NIL9 109 aa13.42□□□□□ -0.26
CALD1-209ENST00000436461 CHST1O43916 411 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms