RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 LRRC29Q8WV35 223 aa13.4□□□□□ -0.26
HLA-DQB2-231ENST00000435145 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PRDX2P32119 198 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 LHX4Q969G2 390 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SLC39A9Q9NUM3 307 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CEBPZOSA8MTT3 80 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SRRM5B3KS81 715 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 ST8SIA5O15466 376 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SPINT2O43291 252 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PROP1O75360 226 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CEACAM4O75871 244 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MBP02144 154 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 EGR1P18146 543 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CD81P60033 236 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GNB2P62879 340 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MSMPQ1L6U9 139 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 Q3ZCU0 254 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 BHLHA15Q7RTS1 189 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR10P1Q8NGE3 313 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR13D1Q8NGV5 346 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DCTN5Q9BTE1 182 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OPN3Q9H1Y3 402 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PROCRQ9UNN8 238 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PSG11Q9UQ72 335 aa13.39□□□□□ -0.27
HLA-DQB2-231ENST00000435145 USF3Q68DE3 2245 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IGKV1D-17A0A075B6S4 117 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IGHV3-43A0A0B4J1X8 118 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CTXND1A0A1B0GTU2 59 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IGHV3-43DP0DP04 118 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IGF2-ASQ6U949 168 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 BEND4Q6ZU67 534 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SEM1Q6ZVN7 128 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 URGCP-MRPS24S4R325 110 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PTPRBP23467 1997 aa13.38□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SPAARA0A1B0GVQ0 90 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MBD3L4A6NDZ8 208 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MBD3L3A6NE82 208 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MBD3L5A6NJ08 208 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FAM90A9PA6NNJ1 464 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CLDN34H7C241 214 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FGF7P21781 194 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 LINC00205P59089 165 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MBD3L2Q8NHZ7 208 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 RFESDQ8TAC1 157 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 EDARADDQ8WWZ3 215 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PARD6AQ9NPB6 346 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GZMHP20718 246 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DUTP33316 252 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 ZNF674Q2M3X9 581 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CYP2G1PQ6ZSU1 146 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NPCDR1Q9BY65 106 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CTDSP1Q9GZU7 261 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 JPT1Q9UK76 154 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 WASF3Q9UPY6 502 aa13.37□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FRYQ5TBA9 3013 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IFITM10A6NMD0 228 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DEFB108AA8MXU0 73 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 LY86O95711 162 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 TFF3Q07654 80 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 Q8N7P7 452 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 R3HDM4Q96D70 268 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DOK5Q9P104 306 aa13.36□□□□□ -0.27
HLA-DQB2-231ENST00000435145 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MGST3O14880 152 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 YPEL1O60688 119 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PLA2G5P39877 138 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MORN2Q502X0 79 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NCMAPQ5T1S8 102 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 C1orf87Q8N0U7 546 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR2Z1Q8NG97 314 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR10G9Q8NGN4 311 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR10G7Q8NGN6 311 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SNX22Q96L94 193 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 YPEL2Q96QA6 119 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SLC25A22Q9H936 323 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 URB1O60287 2271 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PRR14LQ5THK1 2151 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 F2RL2O00254 374 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CYB5BO43169 146 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 TGOLN2O43493 480 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BKO60814 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 KBTBD11O94819 623 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BJP06899 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BOP23527 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BBP33778 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BDP58876 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BCP62807 126 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms