RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 TRIM16LQ309B1 348 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 C11orf88Q6PI97 169 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 CCBE1Q6UXH8 406 aaPredicted RBP18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 MINDY2Q8NBR6 621 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 TMEM230Q96A57 120 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 LIN7CQ9NUP9 197 aaKnown RBP18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 CDC42EP3Q9UKI2 254 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 PRELID3BQ9Y3B1 194 aa18.73■□□□□ 0.59
SMARCAL1-208ENST00000434435 TEX13DA0A0J9YY54 714 aaPredicted RBP18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 CRYM-AS1A6NIL9 109 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 LINC00473A8K010 186 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 MPPED1O15442 326 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 APOA2P02652 100 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 RPL30P62888 115 aaKnown RBP18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 GLDNQ6ZMI3 551 aaPredicted RBP18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 Q71RC1 249 aaPredicted RBP18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 SLC25A42Q86VD7 318 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 SGPP2Q8IWX5 399 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 BCL6BQ8N143 479 aaPredicted RBP18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 ZNF383Q8NA42 475 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 NAA60Q9H7X0 242 aa18.72■□□□□ 0.59
SMARCAL1-208ENST00000434435 TIMM23O14925 209 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 PEX14O75381 377 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 ANXA7P20073 488 aaKnown RBP18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 F2RP25116 425 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 PAX6P26367 422 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 KIR2DS2P43631 304 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 LINC00205P59089 165 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 TAGLNQ01995 201 aaKnown RBP18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 SCGB2A2Q13296 93 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 OXA1LQ15070 435 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 TMEM128Q5BJH2 165 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 C22orf15Q8WYQ4 148 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 DDB2Q92466 427 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 MARVELD1Q9BSK0 173 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 BEX2Q9BXY8 128 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 MEGF9Q9H1U4 602 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 SLC35D1Q9NTN3 355 aa18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 SOX21Q9Y651 276 aaPredicted RBP18.71■□□□□ 0.59
SMARCAL1-208ENST00000434435 INMT-MINDY4F8WBC2 141 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 H0YJW9 148 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 BRS3P32247 399 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 RAB13P51153 203 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 MECP2P51608 486 aaKnown RBP18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 RAG2P55895 527 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 RAB25P57735 213 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 TCTEX1D1Q8N7M0 179 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 OR5AN1Q8NGI8 311 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 CHPT1Q8WUD6 406 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 CAPSLQ8WWF8 208 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 CFHR4Q92496 578 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 MAST4O15021 2626 aa18.7■□□□□ 0.58
SMARCAL1-208ENST00000434435 IGHV3-72A0A0B4J1Y9 119 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 C3orf85A0A1B0GTC6 90 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 H0Y980 276 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 RRASP10301 218 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 MC5RP33032 325 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 DHODHQ02127 395 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 CBX3Q13185 183 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 HABP2Q14520 560 aaPredicted RBP18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 RTL8BQ17RB0 113 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 DEFB112Q30KQ8 113 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 OR2B11Q5JQS5 317 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 ALX4Q9H161 411 aaPredicted RBP18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 BEX1Q9HBH7 125 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 KCNIP3Q9Y2W7 256 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 WASHC3Q9Y3C0 194 aa18.69■□□□□ 0.58
SMARCAL1-208ENST00000434435 MDFIC2A0A1B0GVS7 189 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 INAFM1C9JVW0 142 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 H7C2Y5 167 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 FCGR3BO75015 233 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 B3GALNT1O75752 331 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 OR4E1P0C645 316 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 VSIG10L2P0DP72 767 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 ANXA3P12429 323 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 SRD5A1P18405 259 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 VAMP1P23763 118 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 CD1BP29016 333 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 PPP1R1AQ13522 171 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 LRRC75BQ2VPJ9 315 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 C4orf46Q504U0 113 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 PDPNQ86YL7 162 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 SPAG16Q8N0X2 631 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 OR4S2Q8NH73 311 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 CD300LFQ8TDQ1 290 aa18.68■□□□□ 0.58
SMARCAL1-208ENST00000434435 VGLL3A8MV65 326 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 DHFRP00374 187 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 OR5AC1P0C628 307 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 DYNLT3P51808 116 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 SUPT4H1P63272 117 aaKnown RBP18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 AANATQ16613 207 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 DHRS7BQ6IAN0 325 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 ZDHHC16Q969W1 377 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 GALNT14Q96FL9 552 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 TP53RKQ96S44 253 aa18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 FAM212BQ9NTI7 297 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-208ENST00000434435 RBFOX2O43251 390 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 PRAF2O60831 178 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 VENTXO95231 258 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 HLA-AP01891 365 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms