RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RPL5P46777 297 aaKnown RBP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF137PP52743 207 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 SCAND1P57086 179 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 ARPC4P59998 168 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 RPS16P62249 146 aaKnown RBP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 SPCS2Q15005 226 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 PLGLAQ15195 96 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 MMDQ15546 238 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 SRSF7Q16629 238 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 RNASE12Q5GAN4 147 aaKnown RBP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 KHDC1LQ5JSQ8 128 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 TMEM69Q5SWH9 247 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 MZT2AQ6P582 158 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 CNIH2Q6PI25 160 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 SNX29P2Q8IUI4 249 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 FOXRED2Q8IWF2 684 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 H1FOOQ8IZA3 346 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF383Q8NA42 475 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 BEST4Q8NFU0 473 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 HSPB9Q9BQS6 159 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 GHITMQ9H3K2 345 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 FBXL15Q9H469 300 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 LIN7CQ9NUP9 197 aaKnown RBP4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 SDHAF2Q9NX18 166 aa4.56□□□□□ -1.68
HMGB3P24-201ENST00000433260 A0A0A6YYH2 397 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 CCDC160A6NGH7 325 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 A6NJ64 397 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 H0YJW9 148 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 FCN1O00602 326 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 CTDSP2O14595 271 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 NBR2O15453 112 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 RGS5O15539 181 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 FGF16O43320 207 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 TMEM127O75204 238 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 GABARAPO95166 117 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGHG2P01859 326 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 HLA-DQB1P01920 261 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 CTXN2P0C2S0 81 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 HLA-DMAP28067 261 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 PRSS3P35030 304 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 RFX2P48378 723 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 TAS2R20P59543 309 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 FXYD4P59646 89 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR2B11Q5JQS5 317 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 TCTEX1D4Q5JR98 221 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 PRR31Q5SQ13 230 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 Q6ZS49 121 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 LCNL1Q6ZST4 164 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 HOGA1Q86XE5 327 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 ABHD5Q8WTS1 349 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 ACOT12Q8WYK0 555 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 FLYWCH2Q96CP2 140 aaKnown RBP4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 R3HDM4Q96D70 268 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 GPHA2Q96T91 129 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 DCUN1D5Q9BTE7 237 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 CABLES2Q9BTV7 478 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 TOLLIPQ9H0E2 274 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 IFT46Q9NQC8 304 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 CCL28Q9NRJ3 127 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 KIAA1456Q9P272 454 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 ZNF107Q9UII5 783 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 SCOCQ9UIL1 159 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 GAB2Q9UQC2 676 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 WASHC3Q9Y3C0 194 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR2W1Q9Y3N9 320 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 WSB1Q9Y6I7 421 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 A3GALT2U3KPV4 340 aa4.55□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR5H14A6NHG9 310 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 LINC00473A8K010 186 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 G3V318 75 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 TNFSF12O43508 249 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 DIRAS3O95661 229 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 APOA1P02647 267 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 APOA2P02652 100 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGKV1-16P04430 117 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 HNRNPCP07910 306 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR5H8P0DN80 308 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 IGKV1-13P0DP09 117 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 AADACP22760 399 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 CBX5P45973 191 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 THBS3P49746 956 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 TMBIM6P55061 237 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 GNB1P62873 340 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 SLC35B1P78383 322 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 CD83Q01151 205 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 PSG5Q15238 335 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 FAM71F2Q6NXP2 309 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 C18orf65Q6ZTR6 163 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 LYSMD2Q8IV50 215 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 STPG2Q8N412 459 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 FAM71E2Q8N5Q1 922 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 NPBQ8NG41 125 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR5AP2Q8NGF4 316 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR8H1Q8NGG4 311 aa4.54□□□□□ -1.68
HMGB3P24-201ENST00000433260 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms