RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PLXND1Q9Y4D7 1925 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ATRQ13535 2644 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 CSMD2Q7Z408 3487 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGKV1OR2-108A0A075B7D4 117 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 A0A1B0GTI1 187 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ARGFXA6NJG6 315 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGLL5B9A064 214 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 M0QXV9 152 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ISLRO14498 428 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 UBDO15205 165 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 COX7A2P2O60397 106 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 NDUFS6O75380 124 aaKnown RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 EPPINO95925 133 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGHG2P01859 326 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 CGB3P0DN86 165 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 CGB7P0DN87 165 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ELK4P28324 431 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 CA7P43166 264 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 MAP3K7CLP57077 242 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 GTF2BQ00403 316 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 SYCP1Q15431 976 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRIP13Q15645 432 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM249Q2WGJ8 235 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ACTBL2Q562R1 376 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR10J3Q5JRS4 329 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 RBM48Q5RL73 367 aaKnown RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM131AQ6UXB0 335 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 MARCH3Q86UD3 253 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 OTUD6BQ8N6M0 293 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 DNAAF3Q8N9W5 541 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF738Q8NE65 137 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 FDCSPQ8NFU4 85 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR2K2Q8NGT1 345 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ACTL9Q8TC94 416 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 C22orf15Q8WYQ4 148 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 KLK6Q92876 244 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 YPEL4Q96NS1 127 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 CYTH2Q99418 400 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 SRRQ9GZT4 340 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 PARVGQ9HBI0 331 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 LRTM1Q9HBL6 345 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC22A14Q9Y267 594 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF706Q9Y5V0 76 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC22A7Q9Y694 548 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 HIVEP3Q5T1R4 2406 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 STAB1Q9NY15 2570 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 PDCD11Q14690 1871 aaKnown RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 BAZ2BQ9UIF8 2168 aaKnown RBP1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYH9P35579 1960 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TNRC6BQ9UPQ9 1833 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 NUP210Q8TEM1 1887 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 JMJD1CQ15652 2540 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRAV8-3A0A0A6YYJ7 113 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 CXorf51AA0A1B0GTR3 108 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM213A2RRL7 107 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TLCD2A6NGC4 264 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR5K4A6NMS3 321 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 C8orf87E5RJ46 101 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 POLR3GO15318 223 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 FABP7O15540 132 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 SYNGR1O43759 233 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC2A1P11166 492 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 PTHLHP12272 177 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 F8A1P23610 371 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 HBG1P69891 147 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 HBG2P69892 147 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 PRKCDQ05655 676 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 PRDX1Q06830 199 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 BNIP2Q12982 314 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 ENDOGQ14249 297 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 DEFB113Q30KQ7 82 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TIMM23BQ5SRD1 257 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 ERICH5Q6P6B1 374 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 CLEC20AQ6ZU45 233 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 LRRC6Q86X45 466 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZFP82Q8N141 532 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 RPRMLQ8N4K4 120 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR8S1Q8NH09 359 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 KLF6Q99612 283 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 PRSS27Q9BQR3 290 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 ANGPTL4Q9BY76 406 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF436Q9C0F3 470 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 VSIRQ9H7M9 311 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRIM45Q9H8W5 580 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 CD300AQ9UGN4 299 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 HS3ST2Q9Y278 367 aa1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 HELZP42694 1942 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
HMGB1P27-201ENST00000431429 TACC2O95359 2948 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 AKAP9Q99996 3911 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGHV2-26A0A0B4J1V2 119 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRAV17A0A0B4J275 112 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM183AA6NL82 134 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 C9J4A7 227 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 F5H5T6 163 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 CXorf1O96002 111 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 APOEP02649 317 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 PFN1P07737 140 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms