RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 M0R1X1 148 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 TOR1AO14656 332 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 ZNF137PP52743 207 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 H2BFSP57053 126 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 RPL30P62888 115 aaKnown RBP14.85□□□□□ -0.03
HMGN1-206ENST00000431390 ZNF833PQ6ZTB9 187 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 OR10X1Q8NGY0 326 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 LHFPL5Q8TAF8 219 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 TCTEX1D2Q8WW35 142 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 ADTRPQ96IZ2 230 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 FYTTD1Q96QD9 318 aaKnown RBP14.85□□□□□ -0.03
HMGN1-206ENST00000431390 JMJD1CQ15652 2540 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 A0A096LNT2 108 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 IGLV1-47P01700 117 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 SERPINE2P07093 398 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 RPA2P15927 270 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 ZNF16P17020 682 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-206ENST00000431390 IL3RAP26951 378 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 SRSF4Q08170 494 aaKnown RBP14.85□□□□□ -0.03
HMGN1-206ENST00000431390 ZNF695Q8IW36 515 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 TMEM186Q96B77 213 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 C1orf159Q96HA4 380 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 SIRPDQ9H106 197 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 HEXA-AS1Q9H8Q6 139 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 MMP26Q9NRE1 261 aa14.85□□□□□ -0.03
HMGN1-206ENST00000431390 LINC00473A8K010 186 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 CCSO14618 274 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 SMAD7O15105 426 aaKnown RBP14.84□□□□□ -0.03
HMGN1-206ENST00000431390 ADAP1O75689 374 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 IFNA21P01568 189 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 THBS3P49746 956 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 DVL1P1P54792 670 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-206ENST00000431390 RAP2BP61225 183 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 HLA-DRB5Q30154 266 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 DCAF12L2Q5VW00 463 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 TMEM268Q5VZI3 342 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 GSG1LQ6UXU4 331 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-206ENST00000431390 SELENOHQ8IZQ5 122 aaKnown RBP14.84□□□□□ -0.03
HMGN1-206ENST00000431390 OR11H6Q8NGC7 330 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 CD300LFQ8TDQ1 290 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 RBPMSQ93062 196 aaKnown RBP14.84□□□□□ -0.03
HMGN1-206ENST00000431390 Q96MF0 132 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 ZNRD1Q9P1U0 126 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 TMED3Q9Y3Q3 217 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 INSIG2Q9Y5U4 225 aa14.84□□□□□ -0.03
HMGN1-206ENST00000431390 SIX6O95475 246 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 HOXB5P09067 269 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 KIR2DS2P43631 304 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 ZNF585BQ52M93 769 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 SLC35G3Q8N808 338 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 DDB2Q92466 427 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 ST6GALNAC6Q969X2 333 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 SIRT7Q9NRC8 400 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 PRELID3BQ9Y3B1 194 aa14.83□□□□□ -0.04
HMGN1-206ENST00000431390 AMMECR1Q9Y4X0 333 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-206ENST00000431390 C5orf51A6NDU8 294 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 RBFOX2O43251 390 aaKnown RBP eCLIP14.82□□□□□ -0.041e-18■□□□□ 8.3
HMGN1-206ENST00000431390 HNRNPCP07910 306 aaKnown RBP eCLIP14.82□□□□□ -0.045e-6■■■□□ 18.1
HMGN1-206ENST00000431390 MMP9P14780 707 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 COX7A1P24310 79 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 DLX1P56177 255 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 LOXL1Q08397 574 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-206ENST00000431390 GGNBP1Q5YKI7 109 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 NCR3LG1Q68D85 454 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 LYZL2Q7Z4W2 148 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 VMO1Q7Z5L0 202 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 SPAG16Q8N0X2 631 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 PNKDQ8N490 385 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 PDCD10Q9BUL8 212 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 CHIAQ9BZP6 476 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 CSPG4Q6UVK1 2322 aa14.82□□□□□ -0.04
HMGN1-206ENST00000431390 FAM25EA8MYX2 175 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 B4DSR2 109 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 BRWD1-AS2P59051 145 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 DRAXINQ8NBI3 349 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-206ENST00000431390 LPAR2Q9HBW0 351 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 C13orf42A0A1B0GVH6 325 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 INAFM1C9JVW0 142 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 BUB1B-PAK6H3BSN5 160 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 TOX4O94842 621 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 MSMBP08118 114 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 VDAC1P21796 283 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 LPAR6P43657 344 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 CYCSP99999 105 aaKnown RBP14.81□□□□□ -0.04
HMGN1-206ENST00000431390 PAX8Q06710 450 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 HCP5Q6MZN7 132 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 OR4P4Q8NGL7 312 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 NMES1Q9C002 83 aa14.81□□□□□ -0.04
HMGN1-206ENST00000431390 ODF3BA8MYP8 253 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 RAMP3O60896 148 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 ATG12O94817 140 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 IGKV1-39P01597 117 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 IGKV1D-39P04432 117 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 CT45A6P0DMU7 189 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 CT45A5P0DMU8 189 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 CT45A7P0DMV0 189 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 LINC00205P59089 165 aa14.8□□□□□ -0.04
HMGN1-206ENST00000431390 TAGLNQ01995 201 aaKnown RBP14.8□□□□□ -0.04
HMGN1-206ENST00000431390 OR2B11Q5JQS5 317 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms