RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CLN5O75503 358 aa13.77□□□□□ -0.21
USHBP1-203ENST00000431146 PVALBP20472 110 aaPredicted RBP13.77□□□□□ -0.21
USHBP1-203ENST00000431146 LOXP28300 417 aaPredicted RBP13.77□□□□□ -0.21
USHBP1-203ENST00000431146 VAMP2P63027 116 aa13.77□□□□□ -0.21
USHBP1-203ENST00000431146 EWSR1Q01844 656 aaKnown RBP eCLIP13.77□□□□□ -0.21
USHBP1-203ENST00000431146 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
USHBP1-203ENST00000431146 C1orf229Q6ZS94 237 aaPredicted RBP13.77□□□□□ -0.21
USHBP1-203ENST00000431146 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.21
USHBP1-203ENST00000431146 KIAA1324LA8MWY0 1029 aaPredicted RBP13.76□□□□□ -0.21
USHBP1-203ENST00000431146 H3BP45 60 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 ZG16O60844 167 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 GPR157Q5UAW9 335 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 RBMXL1Q96E39 390 aaKnown RBP13.76□□□□□ -0.21
USHBP1-203ENST00000431146 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 GFOD1Q9NXC2 390 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 RALYQ9UKM9 306 aaKnown RBP13.76□□□□□ -0.21
USHBP1-203ENST00000431146 M0R1X1 148 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 CST7O76096 145 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 GNLYP22749 145 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 GNG10P50151 68 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 PAX9P55771 341 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 BPIFB3P59826 476 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 ODF3L1Q8IXM7 274 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 ZNF295-AS1Q8N0V1 137 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 SAV1Q9H4B6 383 aaPredicted RBP13.76□□□□□ -0.21
USHBP1-203ENST00000431146 NCOR1P1Q9H4R4 102 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 BARX1Q9HBU1 254 aaPredicted RBP13.76□□□□□ -0.21
USHBP1-203ENST00000431146 TACC2O95359 2948 aa13.76□□□□□ -0.21
USHBP1-203ENST00000431146 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 NDUFS6O75380 124 aaKnown RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 IAPPP10997 89 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 SLC25A6P12236 298 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 DUTP33316 252 aaKnown RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 CLINT1Q14677 625 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 CT45A1Q5HYN5 189 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 CT45A3Q8NHU0 189 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 H1FXQ92522 213 aaKnown RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 HSD17B10Q99714 261 aaKnown RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 ABHD14AQ9BUJ0 271 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 LYRM2Q9NU23 88 aaPredicted RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 JTBO76095 146 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 RPL31P62899 125 aaKnown RBP13.75□□□□□ -0.21
USHBP1-203ENST00000431146 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM252Q8N6L7 170 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM217Q8N7C4 229 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 CTSZQ9UBR2 303 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
USHBP1-203ENST00000431146 FCGR3BO75015 233 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 CCL3L1P16619 93 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 COL8A2P25067 703 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 RAB13P51153 203 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 MSMO1Q15800 293 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 IDI2-AS1Q9NZ38 188 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 MMP24Q9Y5R2 645 aa13.74□□□□□ -0.21
USHBP1-203ENST00000431146 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 hADV38S2A0JD32 116 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 ZNF729A6NN14 1252 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-203ENST00000431146 GAPDHP04406 335 aaKnown RBP13.73□□□□□ -0.21
USHBP1-203ENST00000431146 FAM157CP0CG43 387 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 CLRN3Q8NCR9 226 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 OR1S2Q8NGQ3 325 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM204Q9BSN7 226 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 MED9Q9NWA0 146 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 DVL1O14640 695 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 TNFRSF13BO14836 293 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-203ENST00000431146 FGF16O43320 207 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 LY6HO94772 140 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 FABP1P07148 127 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-203ENST00000431146 HFEQ30201 348 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 UBAC2Q8NBM4 344 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 RNF141Q8WVD5 230 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 CORO2AQ92828 525 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 LINC00312Q9Y6C7 94 aa13.73□□□□□ -0.21
USHBP1-203ENST00000431146 SAA2-SAA4A0A096LPE2 208 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 SYNGR2O43760 224 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 SAA2P0DJI9 122 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-203ENST00000431146 EIF5AP63241 154 aaKnown RBP13.72□□□□□ -0.21
USHBP1-203ENST00000431146 LYG1Q8N1E2 194 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 HSD17B11Q8NBQ5 300 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 SH3BGRL3Q9H299 93 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM8BA6NDV4 472 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-203ENST00000431146 NDUFB3O43676 98 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 P0C879 139 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 DYNLT3P51808 116 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 TMEM200BQ69YZ2 307 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 ZNF439Q8NDP4 499 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 FAM122AQ96E09 287 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 SLC25A31Q9H0C2 315 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 RAB9BQ9NP90 201 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
USHBP1-203ENST00000431146 CACNA1BQ00975 2339 aa13.71□□□□□ -0.21
USHBP1-203ENST00000431146 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms