RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SMCHD1A6NHR9 2005 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 PLNP26678 52 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 CADM4Q8NFZ8 388 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 MRPL52Q86TS9 123 aaKnown RBP14.33□□□□□ -0.12
RIF1-204ENST00000430328 NR2C2APQ86WQ0 139 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 DLL1O00548 723 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 ADRA2AP08913 450 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 RPS11P62280 158 aaKnown RBP eCLIP14.33□□□□□ -0.12
RIF1-204ENST00000430328 ASB10Q8WXI3 467 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 PLA2G3Q9NZ20 509 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 CISD1Q9NZ45 108 aaKnown RBP14.33□□□□□ -0.12
RIF1-204ENST00000430328 ORAOV1Q8WV07 137 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 ELSPBP1Q96BH3 223 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 YAE1D1Q9NRH1 226 aa14.33□□□□□ -0.12
RIF1-204ENST00000430328 CACNA1BQ00975 2339 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 ASIPP42127 132 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 NUTF2P61970 127 aaKnown RBP14.32□□□□□ -0.12
RIF1-204ENST00000430328 ATXN8Q156A1 80 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 TMEM155Q4W5P6 130 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 ALX4Q9H161 411 aaPredicted RBP14.32□□□□□ -0.12
RIF1-204ENST00000430328 CTSVO60911 334 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 RUNX1Q01196 453 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 FBLN7Q53RD9 439 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 SPANXA1Q9NS26 97 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 MPZL1O95297 269 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 C19orf24Q9BVV8 132 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 COL1A1P02452 1464 aaPredicted RBP14.32□□□□□ -0.12
RIF1-204ENST00000430328 SYNGR3O43761 229 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 SFTPCP11686 197 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 CTLA4P16410 223 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 HOXD4P09016 255 aaPredicted RBP14.32□□□□□ -0.12
RIF1-204ENST00000430328 IL11RAQ14626 422 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 LDLRAD2Q5SZI1 272 aa14.32□□□□□ -0.12
RIF1-204ENST00000430328 hCG_38984A0A1B0GV85 526 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 MS4A5Q9H3V2 200 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 RPL36A-HNRNPH2H7BZ11 118 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 NAPSAO96009 420 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 GOLT1AQ6ZVE7 132 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 H0Y980 276 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.31□□□□□ -0.12
RIF1-204ENST00000430328 GFERP55789 205 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 RPL32P62910 135 aaKnown RBP14.31□□□□□ -0.12
RIF1-204ENST00000430328 TAF15Q92804 592 aaKnown RBP eCLIP14.31□□□□□ -0.12
RIF1-204ENST00000430328 VSTM2LQ96N03 204 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 WDR54Q9H977 334 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 PRR32B1ATL7 298 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 PPIAL4DF5H284 164 aa14.31□□□□□ -0.12
RIF1-204ENST00000430328 RPL8P62917 257 aaKnown RBP14.31□□□□□ -0.12
RIF1-204ENST00000430328 PQLC2LA1A4F0 135 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 C8orf88P0DMB2 117 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 CBLN1P23435 193 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 CD300LDQ6UXZ3 194 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 TRAV8-1A0A0A6YYK1 113 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 EFNB2P52799 333 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 CCL7P80098 99 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 ZNF585BQ52M93 769 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 LRRK1Q38SD2 2015 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 KLKB1P03952 638 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 TDGF1P3P51864 188 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 SLC25A53Q5H9E4 307 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 ZNF645Q8N7E2 425 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 ST6GALNAC6Q969X2 333 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 ANKRD36A6QL64 1941 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 IGHV3OR15-7A0A075B7D8 119 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 A0A1W2PP11 408 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 CRYBB3P26998 211 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 GPR183P32249 361 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 SFTA2Q6UW10 78 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 MMD2Q8IY49 270 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 C9JCJ5 164 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 S100A7L2Q5SY68 101 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 FAM89BQ8N5H3 189 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 NPIPB4C9JG80 1138 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 H0YL77 283 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 KLK8O60259 260 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 ISG15P05161 165 aa14.3□□□□□ -0.12
RIF1-204ENST00000430328 NHP2Q9NX24 153 aaKnown RBP14.3□□□□□ -0.12
RIF1-204ENST00000430328 TMEM86BQ8N661 226 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
RIF1-204ENST00000430328 GAGE13Q4V321 117 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 LRTM2Q8N967 370 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 PHIPQ8WWQ0 1821 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 HCP5Q6MZN7 132 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 CLDN14O95500 239 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 ZBP1Q9H171 429 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 ZFP64Q9NPA5 681 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 MRM2Q9UI43 246 aaKnown RBP14.29□□□□□ -0.12
RIF1-204ENST00000430328 COL2A1P02458 1487 aaPredicted RBP14.29□□□□□ -0.12
RIF1-204ENST00000430328 OGG1O15527 345 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 G6PC2Q9NQR9 355 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 V9GYH0 126 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 NKG7Q16617 165 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 MARVELD3Q96A59 401 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 HILPDAQ9Y5L2 63 aa14.29□□□□□ -0.12
RIF1-204ENST00000430328 PATE4P0C8F1 98 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 CA7P43166 264 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 STARD6P59095 220 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 GSN-AS1Q9NRJ2 163 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 SF3B6Q9Y3B4 125 aaKnown RBP14.28□□□□□ -0.12
RIF1-204ENST00000430328 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms